Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0265 ATGGGAAGTGCACCATTACCACCAGGTTTTCGTTTCCACCCAACAGATGAAGAACTGGTCGGATATTATCTAAAGAGAAAAGTAGAGGGGCTTGAAATAGAGCTTGAGGTTATCCCAGTCATTGACTTGTACAAATTTGATCCATGGGAACTGCCAGAGAAATCATTCCTCCCAAGGAGGGATATGGAGTGGTTTTTCTTTTGTCCACGAGATCGAAAGTACCCCAATGGATCGCGAACAAATAGAGCTACCAAAACTGGGTACTGGAAAGCCACTGGAAAAGACAGAAATATAGTGTGTCAGTCAACTCCATTCACTGTTACAGGTTATAGAAAGACACTTGTTTTCTATCGCGGAAGAGCTCCACTTGGAGATCGAACCGAGTGGATCATGTATGAGTATCGACTCAACAATGACTCTGATCTCTCAACATCACCTAGTTTCCAGGGTGGTTTTGCATTGTGCAGAGTGATGAAGAAGAATGAGAAAGCGAAGAGTTTGCAGGAAGATCAAAAGGGTAAGGCAGCAGGAAGTAGCTGCACCAGTGGGAATGAAGATGCTTCAAAGAAGACTTCTCCGTACCATGTGGCTCCAACAATGGCAGAGCCAGAGCAAGCTTCTTCCTTGAAGTCAATCAACCCTTCACATTTTGATGTCTCTCCTGAATTGATTCTAGATTCTTCCAAGGACTACTCTCAAGTACAAGATGCAATGTCTGGATGCTTTCCACAGTACGACTTATCATGCTCAATTAATCCATGGCAACCATTCCTAACAACAGAAAATTCAACCGATTCATCTTACTCAAATGTAAATGGAGAGCTTGAATTTGCTGAAGATCTCAATCAATTTGGCTACTTGTATGGAAATGAGCATGTGTCTCGTGAAGGCTTTGATCAAATCAATTCATTCAGATATCCAAAACCCTTCTGA 933 0.4234 MGSAPLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDLYKFDPWELPEKSFLPRRDMEWFFFCPRDRKYPNGSRTNRATKTGYWKATGKDRNIVCQSTPFTVTGYRKTLVFYRGRAPLGDRTEWIMYEYRLNNDSDLSTSPSFQGGFALCRVMKKNEKAKSLQEDQKGKAAGSSCTSGNEDASKKTSPYHVAPTMAEPEQASSLKSINPSHFDVSPELILDSSKDYSQVQDAMSGCFPQYDLSCSINPWQPFLTTENSTDSSYSNVNGELEFAEDLNQFGYLYGNEHVSREGFDQINSFRYPKPF 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0265 310 MobiDBLite consensus disorder prediction 172 189 - -
Lele54g0265 310 MobiDBLite consensus disorder prediction 165 195 - -
Lele54g0265 310 ProSiteProfiles NAC domain profile. 6 160 IPR003441 GO:0003677|GO:0006355
Lele54g0265 310 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Lele54g0265 310 Gene3D NAC domain 15 165 IPR036093 GO:0003677|GO:0006355
Lele54g0265 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 211 - -
Lele54g0265 310 SUPERFAMILY NAC domain 3 160 IPR036093 GO:0003677|GO:0006355
Lele54g0265 310 FunFam Nac domain-containing protein 86 15 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0265 Lele-ChrLele54 2237740 2238956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0265 1 304 NAC Transcription Factor Family AT4G17980 53.722 5.81e-104 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele54g0265 NAM 5.4e-37 No_clan