Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0254 ATGGCTGGTCTGGATTTAGGCACTGCTTCTCGCTTTTTTCCAAATCTCCACAGACCTAACTTGCACCTTCCTCAGCAGCAGCGGCAACACGATTCCGAAGAAGATGCGCATCGGGCCGATCCCTTTTCCAGCGACGACGGTCCCCACCAAGGCCTCGAGCTCGCCTCCGCCGGACCTGGGGACATCGTGGCCCGTCGACCCCGCGGCCGGCCACCGGGCTCCAAGAACAAGCCCAAACCCCCGGTCATAATAACCAGAGAGAGTGCCAACACCCTCCGAGCTCATATTCTCGAAGTCGGTAACGGTTGCGACGTGTTCGACTGCGTCGCCACCTACGCTCGCCGGAGGCAGCGTGGGATCTGTATTCTATGCGGAAGTGGCACGGTGACGAATGTGAGCCTAAGGCAACCTGGAGGTGCTGGAGCTGTAGTGAGTCTGCACGGGAGGTTTGAGATATTGTCGTTGTCGGGATCGTTCCTACCGCCTCCGGCGCCGCCCGGTGCGACCAGCCTTACGATATACTTAGGCGGAGGGCAAGGGCAAGTGGTCGGAGGAAGCGTGGTGGGAGAACTGAGGGCGGCGGGTCCGGTGATCGTGTTCGCTTCTTCGTTTACGAACGTGGCGTACGAGAGACTTCCATTGGACGAAGAGGATCAGGAGCAGCTTCAGATGCAGACACCTGGCTCCGGTCAGGGGGATTCCGGTGGCGGCGGAGGGAATAACTCGTATCCTGACCCATCTTCCGGTCTACCTTTCTTCAATTTGCCGCTTAATATGCCGCAGCAGCAGCAGCACAATGTTCAGTTGCCGGTCGATGGCTGGACCGGAAACTCCGGTCCGCGTCCATCGTTTTAA 855 0.5906 MAGLDLGTASRFFPNLHRPNLHLPQQQRQHDSEEDAHRADPFSSDDGPHQGLELASAGPGDIVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVATYARRRQRGICILCGSGTVTNVSLRQPGGAGAVVSLHGRFEILSLSGSFLPPPAPPGATSLTIYLGGGQGQVVGGSVVGELRAAGPVIVFASSFTNVAYERLPLDEEDQEQLQMQTPGSGQGDSGGGGGNNSYPDPSSGLPFFNLPLNMPQQQQHNVQLPVDGWTGNSGPRPSF 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0254 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 93 206 IPR005175 -
Lele54g0254 284 FunFam AT-hook motif nuclear-localized protein 92 219 - -
Lele54g0254 284 MobiDBLite consensus disorder prediction 218 284 - -
Lele54g0254 284 CDD DUF296 93 168 IPR005175 -
Lele54g0254 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 245 IPR014476 GO:0003680
Lele54g0254 284 MobiDBLite consensus disorder prediction 27 44 - -
Lele54g0254 284 MobiDBLite consensus disorder prediction 1 82 - -
Lele54g0254 284 PIRSF ESCAROLA 8 284 IPR014476 GO:0003680
Lele54g0254 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 223 - -
Lele54g0254 284 ProSiteProfiles PPC domain profile profile. 89 225 IPR005175 -
Lele54g0254 284 Gene3D - 92 228 - -
Lele54g0254 284 MobiDBLite consensus disorder prediction 219 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0254 Lele-ChrLele54 2149834 2150688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0254 1 284 AT-hook Motif Nuclear Localized (AHL) Family AT4G17800 65.686 1.61e-99 291