Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0253 ATGTCCGTAACAGTACCTGGGTACAGAGATTGGCCTTCTCTCCATGACCCAGATCCAAAAATTGTCACAATCCCAATACAACCACCATCCAATCCCCTCCCTCTTCAACCTCATCCCCTCCCAAACCCTAGCTCTTCTTCGTCTGCTTCGACCTCCTTCTGGATCATGTGGAACCCTAGCAGGGATCCTCAGGAAGAAGATGACTCGTGGGAGGTCAGAGCCTTTGCGCAGGACACCACCAACATCATGGGCACCACTTGGCCACCCAGGTCCTACAGCTGCACTTTCTGTCGAAGGGAGTTCCGTTCAGCCCAAGCTCTTGGAGGCCACATGAACGTCCACCGCCGTGACCGTGCCCGTCTCCACCACCACCACCACCACCACCACCACCACTCCCACCAACCACCACCGTCTGCTTCTGCTACTGCTTCCGTTCATCACAGCAACAACCTAATCTCACCTCATCATCATCATCAAGAGCTTGTTGCAAACAACGGCAGATTCTTTCTCTATCATTTGCCAAGGCCTGACGGGATCGGAAACTTGACTGGTACTAGTAATACTACCAATACTACTAATACTCTTTCTTCTTCTTTGAATGCATGTGGAGAATCAGTATCACCTACCCCGCTTTACTCCATTATGCCCTACCCACCAAGCAACTTGGTGTCAACTAGCACCCCCTCCTGTGATTTTCAAGCGGAGCGGCGGCCTGCAGGATTCATTAATTCTTCTTTCTGTGATTCTACGAAAATGGAACAGCCCACAACCTCCTCGTTCGCCGGCAACAGTGGCCACGAGGAGCTTGATCTAGAGCTCCGGCTGGGGCACAAACCACCAGCTAGCAGAAATCACAAACGTTGTTTCTGA 870 0.5172 MSVTVPGYRDWPSLHDPDPKIVTIPIQPPSNPLPLQPHPLPNPSSSSSASTSFWIMWNPSRDPQEEDDSWEVRAFAQDTTNIMGTTWPPRSYSCTFCRREFRSAQALGGHMNVHRRDRARLHHHHHHHHHHSHQPPPSASATASVHHSNNLISPHHHHQELVANNGRFFLYHLPRPDGIGNLTGTSNTTNTTNTLSSSLNACGESVSPTPLYSIMPYPPSNLVSTSTPSCDFQAERRPAGFINSSFCDSTKMEQPTTSSFAGNSGHEELDLELRLGHKPPASRNHKRCF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0253 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 92 119 IPR013087 -
Lele54g0253 289 MobiDBLite consensus disorder prediction 121 145 - -
Lele54g0253 289 ProSitePatterns Zinc finger C2H2 type domain signature. 94 114 IPR013087 -
Lele54g0253 289 SUPERFAMILY beta-beta-alpha zinc fingers 89 119 IPR036236 -
Lele54g0253 289 MobiDBLite consensus disorder prediction 22 41 - -
Lele54g0253 289 PANTHER OS07G0101800 PROTEIN 64 279 - -
Lele54g0253 289 MobiDBLite consensus disorder prediction 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0253 Lele-ChrLele54 2125442 2126311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0253 56 211 C2H2 Transcription Factor Family AT4G17810 45.238 1.77e-32 116