Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0246 ATGGAACTTCTCGCTCTCAGACATTTCCCCCTTTTGCTATATTCTCTACTCTGCTTCTGTCATTTCTCATTGCAGGTTTCTTTTACGGGTGATTCTGAGATTCTTCTGCGGGTTAAGACTGCTCAGATCGTTGATGAGAATGGTAGCCTCAATAACTGGGACAGAGGCGTAAGTCCCTGTAACTTGATTGGCATTACCTGTGATGAACTTAATCGCTCGGTTGTCGCTATTGACCTCTCTGGTACTGGCATTTCTGGTGGATTTCCGTTCGGTTTTTGTCGCATTCGGACCCTGCTAAGGCTTTCTGTTGCGCAAAATTACCTCGGTGGTGTCGTTTCTCCTCAATCACTCCTTCTCTGTTCTCACCTTCGTGTCTTGAACCTCTCTGATAACTTATTTGTCGGCGAGTTGCCACGATTCTCGTCGGAGTTCTCTCAACTGAGACGCCTTGATTTCTCGCGTAACAACTTTACGGGCGATATTCCGGCAAGTTTTGGCCGGTTTCCACATCTCAGGATGCTCAGTTTGTCTTCGAACTTGCTCAACGGGACCATTCCCGCTTTCTTAGGCAATCTCAGTGAGTTAACTCGACTGGAACTCGCTTATAATCCGTTCAGGCCAGGACCTTTGCCCTCCCAACTTGGAAATTTATCGCACCTCGAAATTATGTTCCTTCCCGGTTCAAATGTCGAAGGGAGTATACCGGACTCAATAGGGAAGCTGGTCTCGCTCAAGAACTTGGATTTGTCACAAAATTTGCTGTCAGGTAAAATTCCAGATAGCATTTCGGGTTTGAAAAGTGTAGAACAAATATTGCTATTTCTAAACCAACTTTCAGGTGAAATTCCTCAAGGTTTGGGAAACCTTAGCAGTTTGATTAATTTAGACCTATCTCAAAATAATCTCACCGGGAAATTACCGGATTCACTCGCTGCCTTGCGTCTCCATTCTCTGCAATTAAACGACAATTTCCTCGAAGGAGAAATCCCCGTGAATGTAGCTACAAATCCAAATTTACTGAGACTAAAGCTCTTTAATAACAGCTTTACTGGGAAACTACCCGAAGATCTCGGTCTATACTCCGATTTACGGGAACTTGATGTATCTACCAATGACTTGGTTGGCGAATTGCCCAAGTACGTCTGTGAAAGGAACAAGTTGCAGCGTCTTGTCACATTCAGGAATCGCTTTTCCGGAACTCTCCCTGAGCAATATGGAGGTTGTCAATCACTCAACTATGTCAGAATCGAGTACAACCAGCTCTCTGGTGAGGTGCCTTCAGAATTCTTGAAACTTCCTGGCCTTGAAATTTTAAGGATGAATAACAACTTGTTGGAAGGTTCACTCTCCATCTCCGGCGCTCAGAGACTCTCCTTACTTCGTATATATGATAACAGGTTTTCTGGACATCTCTCTGCAGAAATTTGTGAACTCCACGATATTAGAGAGATTGACATTAGTCGGAACCAGTTTACTGGTAAAGTTCCGTCATGTATAACTGGATTGAAGAAGTTACAGAAGCTGAGCATGCAGGAGAACATGTTCACCGGCGCGATTCCTCGTAACGTTAATTCCTGGACTGACTTGAACCTGTTGAACTTGTCGTATAACAGATTCTCCGGTACGATTCCGCCAGAGCTTGGTAATTTGCCAGGTTTGAGTTCTCTTGATCTTGCCATGAATGTCCTGACTGGGGGAATCCCGCCGGAGTTAGCAAAGCTCAAGCTCAGCCAGTTCAACGTGTCGGGAAACAAATTGTCTGGAAATGTACCTTCAGGGTTCAACAATGAATTCTATATGTCGGGTCTGGTAGGTAATCCGAACCTCTGCAGCGAAGTCATGAAATTCCTTCATCCTTGCTCCGAATCCAAACACTTCTCTTCGATAGCCATTATTGTGTTATCTACCTTTGCTTTACTTCTGGGGTTTCTCCTCTTGTTCCGCAAGAGCAATAAGTCATTCTTTTTAACTGACAAATCCAAGCGCTCTTTTAGGACAACAACATTCCACATGGTGGGGTTTAACGAAGAAGATGTTGTTCCATTGCTAACCAGTGAGAATCTCGTTGGCACAGGGAGTTCGGGCCAGGTCTATAGGGTGAAGCTGAAAACAGGGGAGACAGTTGCGGTGAAGAAGCTGCGGGAAGGACGTGCAGGAAAACTGAATAGTACAGATTCGGTTTTCAAAACGGAGATTGAGACACTGGGAAGAATTCGTCATGTTGATATAGTAAAATTGCTATATAGTTGCAGTGCTGACGATTTCCAGATTCTGGTGTACGAATATTTGGAAAACGGCAGCTTGAGTGACAATTTGCACGGTGAAAAGTGCAGTGAGTTGATGAATTGGTCGAGGCGGTTCAACATAGCAGTAGGTGCAGCTCGGGGACTGGCTTATTTACACCACGACTGTGTGCCGCCTATAGTTCACAGAGACATCAAGAGTAGTAACATATTGCTGGATCAAGATTTCAAACCTCGTCTTGCAGACTTTGGGTTGGCTAAAACCTTGCAGCCAAAGGCAAACGGAGATGGGGGTAGGGCTACGTCCAGGGTCGCTGGGTCCTATGGTTACATTGCTCCAGAATATGCTTACACACTAAAAGTAACTGAGAAAAGTGATGTGTATAGCTATGGTGTAGTGCTGATGGAATTGATCACAGGCAAGAGGCCAAATGACCCATCCTTTGGTGAGAACAGGGATATAGCGAAGTGGCTCACTGAGATTGCTTTATCAAGTTCTGCAGGAGGGAGTGGCAATTTGGAATGCCTGGTTCAGATTGTAGACCCTAGATTGAACCCCTCCACGTACGATTATGTAGAGATTGGGAAGGTTTTGAATGTGGCACTGCTTTGCACCTCAACGTTCCCCATTAATAGACCGTCAATGAGAAGGGTGGTCGACTTGCTCAGGGGACATAAGACTCGTCCTAAATCATGA 2940 0.4503 MELLALRHFPLLLYSLLCFCHFSLQVSFTGDSEILLRVKTAQIVDENGSLNNWDRGVSPCNLIGITCDELNRSVVAIDLSGTGISGGFPFGFCRIRTLLRLSVAQNYLGGVVSPQSLLLCSHLRVLNLSDNLFVGELPRFSSEFSQLRRLDFSRNNFTGDIPASFGRFPHLRMLSLSSNLLNGTIPAFLGNLSELTRLELAYNPFRPGPLPSQLGNLSHLEIMFLPGSNVEGSIPDSIGKLVSLKNLDLSQNLLSGKIPDSISGLKSVEQILLFLNQLSGEIPQGLGNLSSLINLDLSQNNLTGKLPDSLAALRLHSLQLNDNFLEGEIPVNVATNPNLLRLKLFNNSFTGKLPEDLGLYSDLRELDVSTNDLVGELPKYVCERNKLQRLVTFRNRFSGTLPEQYGGCQSLNYVRIEYNQLSGEVPSEFLKLPGLEILRMNNNLLEGSLSISGAQRLSLLRIYDNRFSGHLSAEICELHDIREIDISRNQFTGKVPSCITGLKKLQKLSMQENMFTGAIPRNVNSWTDLNLLNLSYNRFSGTIPPELGNLPGLSSLDLAMNVLTGGIPPELAKLKLSQFNVSGNKLSGNVPSGFNNEFYMSGLVGNPNLCSEVMKFLHPCSESKHFSSIAIIVLSTFALLLGFLLLFRKSNKSFFLTDKSKRSFRTTTFHMVGFNEEDVVPLLTSENLVGTGSSGQVYRVKLKTGETVAVKKLREGRAGKLNSTDSVFKTEIETLGRIRHVDIVKLLYSCSADDFQILVYEYLENGSLSDNLHGEKCSELMNWSRRFNIAVGAARGLAYLHHDCVPPIVHRDIKSSNILLDQDFKPRLADFGLAKTLQPKANGDGGRATSRVAGSYGYIAPEYAYTLKVTEKSDVYSYGVVLMELITGKRPNDPSFGENRDIAKWLTEIALSSSAGGSGNLECLVQIVDPRLNPSTYDYVEIGKVLNVALLCTSTFPINRPSMRRVVDLLRGHKTRPKS 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0246 979 Pfam Protein kinase domain 685 893 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0246 979 SMART serkin_6 683 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0246 979 Gene3D Ribonuclease Inhibitor 295 623 IPR032675 -
Lele54g0246 979 SUPERFAMILY RNI-like 69 381 - -
Lele54g0246 979 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Lele54g0246 979 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Lele54g0246 979 FunFam Leucine-rich repeat receptor-like protein kinase 763 979 - -
Lele54g0246 979 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 198 971 - -
Lele54g0246 979 Gene3D Ribonuclease Inhibitor 185 285 IPR032675 -
Lele54g0246 979 ProSiteProfiles Protein kinase domain profile. 683 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0246 979 Pfam Leucine rich repeat 146 204 IPR001611 GO:0005515
Lele54g0246 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Lele54g0246 979 Pfam Leucine Rich Repeat 292 312 IPR001611 GO:0005515
Lele54g0246 979 Pfam Leucine Rich Repeat 243 265 IPR001611 GO:0005515
Lele54g0246 979 SUPERFAMILY Protein kinase-like (PK-like) 683 970 IPR011009 -
Lele54g0246 979 SUPERFAMILY L domain-like 315 591 - -
Lele54g0246 979 FunFam Leucine-rich repeat receptor protein kinase EMS1 234 312 - -
Lele54g0246 979 FunFam Leucine-rich repeat receptor-like protein kinase TDR 313 622 - -
Lele54g0246 979 ProSitePatterns Protein kinases ATP-binding region signature. 689 720 IPR017441 GO:0005524
Lele54g0246 979 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 143 209 - -
Lele54g0246 979 Gene3D Phosphorylase Kinase; domain 1 668 762 - -
Lele54g0246 979 Gene3D Transferase(Phosphotransferase) domain 1 763 978 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0246 Lele-ChrLele54 2045035 2048054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0246 25 975 Receptor kinase-like Gene Family AT5G65710 54.620 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele54g0246 Pkinase 2.8e-45 CL0016