Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0226 ATGTTGTCCACTCTTCCACCTTCTGGCCCTTTCCTCGATAACCCCTTCTGGGCCTCGGACGGCTCTTTCCCGACTCCATGGGAAGGCCCGGGCTTGGGCCCCTGCCCCTGCCCCGGCCTGTCCCCGTGCCCGGACGTTCTATCCTCCCCCATCAAGGCGGCTGGTAAGTCTTCCCAGGCCGATGTCAACGTGAAACGCGAGGCGCCATCCATTCTGGACGAGCGAAAACTGCGGAGAAGGATATCGAACCGGGAGTTGGCGAGGCGGTCACGCATGCGAAAGAAGAAGCATCTAGAGAACTTAAGGTTTCAGGTGAACCGGTTTAGGATCCAAAACGGGGAACTCAACAACAGGTTGCAGTTTCTTCTGCATCACTATAACCGAGTGAGCACGGAGAACCAATGGCTCCTGTCCGAGCAAACCGAGCTCCGACAAAAACTTCACAATATAACTCAAATCTTTGCTCTCCAGCCCTTCTCCTCATCGTCCGCATGGCCATGCAATTCTACTAGCTATAGTATTTTCACGACAGAATAA 537 0.5438 MLSTLPPSGPFLDNPFWASDGSFPTPWEGPGLGPCPCPGLSPCPDVLSSPIKAAGKSSQADVNVKREAPSILDERKLRRRISNRELARRSRMRKKKHLENLRFQVNRFRIQNGELNNRLQFLLHHYNRVSTENQWLLSEQTELRQKLHNITQIFALQPFSSSSAWPCNSTSYSIFTTE 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0226 178 SMART brlzneu 71 135 IPR004827 GO:0003700|GO:0006355
Lele54g0226 178 SUPERFAMILY Leucine zipper domain 75 126 IPR046347 GO:0003700|GO:0006355
Lele54g0226 178 Coils Coil 98 118 - -
Lele54g0226 178 FunFam BZIP transcription factor 73 124 - -
Lele54g0226 178 Gene3D - 73 128 - -
Lele54g0226 178 PANTHER BZIP TRANSCRIPTION FACTOR 44 55 157 - -
Lele54g0226 178 CDD bZIP_plant_GBF1 76 127 IPR045314 GO:0003700|GO:0006355
Lele54g0226 178 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 136 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0226 Lele-ChrLele54 1883435 1883971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0226 1 157 bZIP Transcription Factor Family AT3G49760 35.404 4.19e-22 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele54g0226 None None None