Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0222 ATGACAAGGAACATGCGTTGCTCTTCATCAGGAAAATTAGTGGTGGCTCTGTTTCTGATAATGTTATTCTACACAACTTGCAAGGAACTCGAGGGACACCACAACTGTTATAGCTTGTGCGGAGATCACAACGTTAGCAGCCCTTTTCGTCTAAAAAACTCTCCAGACGAGTGTGGTGACAAGAGGTACAACCTATCTTGCGAGCAAAACCAACTGGTAATGTACTTGCAATCTGTGAGATACAGAGTTTTGTCCATTAATTATGAGAACTACACAATCCGAGTGAGGGATTCTAATATTTTGGAGTCGGATTCCTCTTCGCTTCCTGGGTATTCTTTAACAGACTACAAATATAGCCATACGTATCCATATCTCTTCAGCATTTCTGCACGTAATGAAGAACGAACTTGGCTAAGGGTTGGATTGAACAGAAATAGGATGATGATATACGTAAGGTGTGAACGCCCTGTGGGTTCCCGTGGGTTTGTGGACACAGCCCCTTGCTTCAAAACTTCAAATGGCTCTGTAGCTTCATATTTATATGTAAATGTTGGCAGCGAAACTCTAGGGGATGTGGGGTTAGAGGATGATTGCAGTGTAGAAGTGATGTATATGACTTCGTGGCCTGCTCTGAAGAACAACCAGTCTTGGTCCTGCACAGACATCCACAGTATGCTTGTTTATGGCTTTGAGCTTTCTTGGCTCTACAGTTTCTGCCCCAACAATGGATATTATTACGCAAGAATAATTCTCGGTGTCGGTGGTGAGGAAATAAGCTGTCTAAAAGGTGTAATTGCAGCACACAGCATTAGCCCTTTGATTATCGCCCTGGACTATGCGGGAATCATCTCCACTCTGTTAGCTCTTTATACTGGAGCTAAATTTGTCTTGGGGGCTCCATTTGTCATTGCCCTTTTGATCTATAAATTTCGGCGAAGACATTTATCAATGTATGACAGCATAGAAGATTTTCTGCAAAGCGACAACAACAACATCATCCCTATAAGGTACTCCTACAAAGACATCAAGAAGATCACAAAAGGGTTTAACTTAAGACTTGGGAAAGGAGGCTATGGCTCTGTTTTCAAAGGACAACTTCGAAGTGGTCGTCATGTGGCTGTCAAGATGTTGGATAAGGCCGAAGCCAATGGTCAGGATTTCATCAATGAAGTTGCGACCCTTGGTAGAATCCACCATGTTAATGTGGTGCATCTCATCGGTTATTGCGTGGAAGGTTCGAAGCGTGCTCTTATATATGAATTCATGCAACATGGATCTCTCGACAAATATATTCTCTCTAAACCTAATCATGATGAGCAATCATCCTTGAATCTTCATCAATTGTATACCATTTCTCTCGGAGTAGCTCGTGGTATTCAATATCTTCACAAAGGATGTGATATGCAAATTCTGCATTTTGATATAAAGCCGCACAACATCCTTCTCGATGACAACTTCATCCCGAAGGTTTCTGATTTCGGCCTTGCTAAACTCTATCCTACAAATAATAGTATTGTGTCTCTTACAGCAGCAAGAGGAACTATAGGATATATGGCCCCTGAACTCTTCTACCAAAATGTGGGTGGAGTCTCTTACAAAGCTGATGTCTATAGTTTTGGGATGTTACTAATGGAGATGGCTGGTAGAAGGAAGAATTTGAATGTGCTGACTGAACATTCAAGTCAATTTTACTTTCCTTTTTGGGTTCATGATCAACTAAATGAAGGAAACGAAATCAACATTGCCGATGCAACAGAGGAAGAAATGACAGTGGCGAGGAAAATGATGATCGTTGGGTTGTGGTGCATTCAAACCAAGCCTGGCGATCGTCCTTCAATGAACAAAGTCGTGGAGATGCTTGAGGGAGATGAGCAAGACTTAGAATTGCCTCAAAAGCCTTACCTATATCCACAAGATTTACCTACAGCATATGATAATAATCACTCAAGTTCAACACGGCGATCCGAATCAAACAGTCATCCTTCAATGATCAAAGCTATGGAGATGCTTGAAGAGAAGAGCAAGAGTTAG 2031 0.4175 MTRNMRCSSSGKLVVALFLIMLFYTTCKELEGHHNCYSLCGDHNVSSPFRLKNSPDECGDKRYNLSCEQNQLVMYLQSVRYRVLSINYENYTIRVRDSNILESDSSSLPGYSLTDYKYSHTYPYLFSISARNEERTWLRVGLNRNRMMIYVRCERPVGSRGFVDTAPCFKTSNGSVASYLYVNVGSETLGDVGLEDDCSVEVMYMTSWPALKNNQSWSCTDIHSMLVYGFELSWLYSFCPNNGYYYARIILGVGGEEISCLKGVIAAHSISPLIIALDYAGIISTLLALYTGAKFVLGAPFVIALLIYKFRRRHLSMYDSIEDFLQSDNNNIIPIRYSYKDIKKITKGFNLRLGKGGYGSVFKGQLRSGRHVAVKMLDKAEANGQDFINEVATLGRIHHVNVVHLIGYCVEGSKRALIYEFMQHGSLDKYILSKPNHDEQSSLNLHQLYTISLGVARGIQYLHKGCDMQILHFDIKPHNILLDDNFIPKVSDFGLAKLYPTNNSIVSLTAARGTIGYMAPELFYQNVGGVSYKADVYSFGMLLMEMAGRRKNLNVLTEHSSQFYFPFWVHDQLNEGNEINIADATEEEMTVARKMMIVGLWCIQTKPGDRPSMNKVVEMLEGDEQDLELPQKPYLYPQDLPTAYDNNHSSSTRRSESNSHPSMIKAMEMLEEKSKS 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0222 676 Gene3D Phosphorylase Kinase; domain 1 325 421 - -
Lele54g0222 676 MobiDBLite consensus disorder prediction 632 676 - -
Lele54g0222 676 Pfam Protein tyrosine and serine/threonine kinase 352 620 IPR001245 GO:0004672|GO:0006468
Lele54g0222 676 PANTHER RUST RESISTANCE KINASE LR10-RELATED 319 648 IPR045874 GO:0004672
Lele54g0222 676 SMART serkin_6 347 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0222 676 Gene3D Transferase(Phosphotransferase) domain 1 422 632 - -
Lele54g0222 676 FunFam serine/threonine-protein kinase PBS1-like 317 421 - -
Lele54g0222 676 MobiDBLite consensus disorder prediction 642 662 - -
Lele54g0222 676 FunFam PR5-like receptor kinase 422 631 - -
Lele54g0222 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Lele54g0222 676 ProSiteProfiles Protein kinase domain profile. 347 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0222 676 SUPERFAMILY Protein kinase-like (PK-like) 328 622 IPR011009 -
Lele54g0222 676 Pfam Wall-associated receptor kinase galacturonan-binding 36 97 IPR025287 GO:0030247
Lele54g0222 676 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0222 Lele-ChrLele54 1855820 1859949 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0222 18 643 Receptor kinase-like Gene Family AT1G66910 36.850 1.67e-110 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele54g0222 PK_Tyr_Ser-Thr 1e-46 CL0016