Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0212 ATGGGGAATTGTCAGGCGGCGGAGGTGGCGACGGTTGTGATTCAGCATCCGGGGAATAAGATCGAGAGGATTTATCGGTCGGTGAGCTCTCACCAGGTGATGAACTCTAATCCTGGTCACTACGTTGCTCTCGTTGTTACTTCGCCCACTCTTAAGTCCGAGAATGGCGCGCCATTGAAGCAGCTCAAACTTCTCCGACCCGACGATACTTTGCTCATGGGCCAGGTTTATCGCTTGATCAGTTTTGAAGATGTATTGAAGGAGCTGTCTGCAAAAAAATGCGTTAAACTTGGGAAATTGATGAAGGACAGAGGCGGTCTTGGCGTTCACATCAAGCACAGAGACTCCAGAGCTCCAAATCCGAGTCCGAGTTCCAGACCCGATTTCGCTCCCATGAAGGTGGAACAGGAGATTCACCGAATGGGAAGCAATGGCGGCAGCAGCAGCAGTCACAAAGTGGTGGGAAGACAATATGGTGGTGGTGGGGGGCAATGGAGGCCAGCCTTACAGAGCATTGCAGAATTTGGAACTTGA 534 0.5131 MGNCQAAEVATVVIQHPGNKIERIYRSVSSHQVMNSNPGHYVALVVTSPTLKSENGAPLKQLKLLRPDDTLLMGQVYRLISFEDVLKELSAKKCVKLGKLMKDRGGLGVHIKHRDSRAPNPSPSSRPDFAPMKVEQEIHRMGSNGGSSSSHKVVGRQYGGGGGQWRPALQSIAEFGT 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0212 177 MobiDBLite consensus disorder prediction 140 162 - -
Lele54g0212 177 Pfam PADRE domain 1 174 IPR025322 -
Lele54g0212 177 PANTHER EXPRESSED PROTEIN 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0212 Lele-ChrLele54 1793755 1795717 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0212 54 1793755 1795717 Lele49g0362 49 2135313 2138172 CCT
Lele54g0212 54 1793755 1795717 Lele50g0394 50 2207710 2210820 CCT
Lele54g0212 54 1793755 1795717 Lele51g0376 51 2162644 2165519 CCT
Lele54g0212 54 1793755 1795717 Lele52g0391 52 2294682 2297782 CCT
Lele54g0212 54 1793755 1795717 Lele55g1279 55 19282303 19284784 hybridization
Lele54g0212 54 1793755 1795717 Lele56g1226 56 15644506 15646465 hybridization