Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0196 ATGGAAGAAGAGTACGGTAGGATAGTGGTAGTGAGAGAGTTCGAGCCAGATAAAGACAGAGAGAGAGTGGAAGCCGTAGAAAGAATATGTGAAGTTGGACCCAGTGGGAAGCTTTCCCTCTTCACCGACCTCCTCGGTGACCCAATTTGCAGGGTCCGCCACTCCCCTGCTTTCCGCATGCTGGTGGCTGAGGTAGGCGAAGAGATTGTTGGAATGATAAGAGGTTGCATCAAAACCGTCACATGCGGAAAGAAGCTCTCCAGAAATGGAAACTTCACTGAACCCCTCCCTGTATACACCAAGCTCGCTTATATCTTAGGTCTTCGCGTCTCTCCTTCTTACCGGAGACTGGGAATAGGGTTGAAGCTGGTGAAGACAATGGAGGAATGGCGCGTCGCGCGTGAAGCGTACACTGGCTACAACGACGCGGATTGTGGACCGGGCGTTGCCGTTTCTGCAGCTGCCGTCGATCCCGAATTTCTTCAGGCCGTTTGGGTTTCACTTCATGTATGGTTTAGGAGGAGAAGGACCAGAGGCGGCGAAGATGGTGAAGGCGTTGTGCGGGCACGCGCACAACCTCGCGAAGGAGCGTGGGTGTGGGGCGGTGGTGACGGAGGTTTCCAGCTGCGAACCGTTGAAGTTAGGGATACCACACTGGAAGATGCTATCATGCGCCGAGGATTTATGGTGCATCAAGAGGCTCGGGGAAGACTATAG 717 0.5384 MEEEYGRIVVVREFEPDKDRERVEAVERICEVGPSGKLSLFTDLLGDPICRVRHSPAFRMLVAEVGEEIVGMIRGCIKTVTCGKKLSRNGNFTEPLPVYTKLAYILGLRVSPSYRRLGIGLKLVKTMEEWRVAREAYTGYNDADCGPGVAVSAAAVDPEFLQAVWVSLHVWFRRRRTRGGEDGEGVVRARAQPREGAWVWGGGDGGFQLRTVEVRDTTLEDAIMRRGFMVHQEARGRL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0196 238 Gene3D - 39 141 - -
Lele54g0196 238 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 136 - -
Lele54g0196 238 Pfam Acetyltransferase (GNAT) family 56 134 IPR000182 GO:0016747
Lele54g0196 238 CDD NAT_SF 60 130 - -
Lele54g0196 238 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 177 IPR000182 GO:0016747
Lele54g0196 238 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 47 136 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0196 Lele-ChrLele54 1691667 1693077 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele54g0196 Acetyltransf_1 6.1e-11 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0349 49 2061074 2063968 Lele54g0196 54 1691667 1693077 CCT
Lele54g0196 54 1691667 1693077 Lele55g1292 55 19399716 19401191 hybridization
Lele54g0196 54 1691667 1693077 Lele56g1241 56 15751797 15753274 hybridization