Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0194 ATGAATCTTCATATCTTTATCTTCTTTTATCTCATTTCATTATCTCTATGCCACACGGCCAAGGCCGGGACCAAATCTATCATCAGCTTCAGAACTTTCAATGAATCTCGACCAAGAAGAATTCTGCACCAACCGTTGTTCCCAGACGATTCTGCTCCACCACCAGCCGCCGTTGAGTCGCCACCGCCACCGCCACCGGACACCCCATCTTCTCCCGACATTCCTTTCTTTCACGAGAATCCTGTAGGACCAACGCCGGATCAGAATCAGCCACCACCGGCGATTCCCAATGGCATCACAGCAGTTCCGAATCCGACGGCAACAACAACAACGGCGAGCAAGCCGACGAAGAAGGTTGCAATCGCCATGTCTGTTGGAATTGTGACGCTTGGTATGCTCTCTGCACTTGCCTTCTTCTTGTACAGACACCGTGTTAAGCACCCCAGTGAGACCCAGAAGCTCGTGAATGGGAATTCTCAGGGGATTAACGAGGATTCTTCGGGGGGCCCACCGTCGAGTTTTCTGTACATTGGTACGGTGGAGCCGACACGAGCTGAATCAGTGAGTGAGCCCGTTGAGTCTAATGGAGGAAACAAGTCGCCTTATCATAAACTAAATCCACCCAAGCGATCCGATCGGTACCGGCCAAGTCCTGAATTGCAGCCATTGCCGCCGCTAACAAAGCCACCAGATGGGAATTACCCGCCGGCAATATCTTCTTCTTCTTCTTCTTCGTCGTCGGCGTCCGACGAGGAAAGCAACGACATGGCATTTCATACGCCACACGGGTCATCGCTGAGCTACGAAGATGGCTACTACACGCCAATTTCGCGCCAGAGTTCTCTGGCTAACGGTAGCCCGACGGTGACTGCGAGGAGTGAGACTCATTCCAACAATTCTCATCCTTTTTCAAAGAGGACATCGCCAAAATCTCGCTTCACTGTTCCTTCGCCGGATGTGAGGCCTGTTATTATACCATCTATAAAGCAGGCTCCTCCTCCTCCTCCTCCTCCTCTCCCGCCGCCGCCTCCGGAAACTCGATCAGCACCATTTCAGCTTGTAGATAAACAAGTGACCTCCGGCGCTTCTAGAAGGCCAAAATTCTCAGCGCCTCCTCCTGCACCAAATTTGACGCATCTCCAGTCAACAACAGACTACACACCACAGGACACGTCGAGGACTTCACCTAAACATCCTCCGCCTCCGCCACCGCCTCCTCCACCACCACCACTGCAAACAACACCTAGGAAAACAGTGTCTCCGGCGATTAGCGTTCCCTCATCTTCTGCATCAAGAAAACAACAGTCTTGGTCTGCAAGTGAAGGAACAGATTCTGTTAAAAGTATAAAAAAAGTCTCAGATTCTGAACATGCTGATGCAAAGCTCGTCGCCTCTTCCGGGAGGACGGAAGCCGATGACGACATGGACGGAGGGAAACCCAAGTTAAAGGCTCTGCATTGGGATAAAGTGCGGGCAACCTCAGATCGTGCTACAGTTTGGGACCAGCTAAAATCAAGCTCTTTTCAATTAAATGAGGACATGATGGAGAGCCTGTTTGGCTGCAACAATTCTACAAATGTGGTTCCAAAAGAAGCGCCTAGAAAACTAGTTCTTCCTCCTGTTAATCAGGAGGAGAAGGTGCTGGATCCGAAGAAGTCACAGAACATAGCTATACTACTTAGGGCACTGAATGTTACAAGAGATGAAGTCTGCGAAGCTCTTTTGGACGGGAATCCTGAAGGTTTGGGTACTGAACTATTTGAAACTCTAGTAAAGATGGCTCCCACTAAGGAGGAAGAGGTGAAGCTGAAGAAGTATGATGGTGACCTTTCAAAACTTGGCTCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTCAAAAGAGTTGAAGCCTTGCTCTACAGAGCTAACTTTGATACTGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTGGAGGCGGCGAGTGAGGAATTGAAGAACAGTCGGTTGTTCCTCAAACTCCTCGAAGCTGTTCTTAGGACAGGAAATAGAATGAATGTCGGCACCAATCGCGGTGATGCTAAAGCTTTTAAACTGGACACACTGCTAAAACTGGTAGACATAAAGGGAACCGATGGTAAGACGACATTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCAGAAGGCGAGGGCGGTGATTCTTCGAATGAGAATGTTCAGAAGAAAATGAATTCCAAATTCAATGAGGATGAGTTCAAGAAGCAAGGATTGCAGGTTGTGGCTGGTCTAGGTAGAGACCTAAGCAATGTGAAGAAAGCAGCAACAATGGATTCAGATGTCTTAAGCAGCTATGTCACGAAGCTCGAAATGGGGCTGGAGAAAGTGAGATCTGTTCTGCAATACGAAAGATCGGAAACGAAAGGGAATTTCTTCAACTCCATGAAGCTATTTTTAAGAGATGCAGAAGAGGAAATTGTTAGGATCAAGGACGACGAAAGAAAGGCTTTATTCCTTGTGAAAGAAGTAACAGAATACTTTCATGGGGATACAGCAAAAGAAGAAGCCCACCCTTTCAGAATCTTCATGATTGTAAGAGACTTTCTGAATAGTTTGGATCAAGTTTGCAAAGAAGTGGGAAGAATGCAAGATAGAATCATGGTTGGTGCTGCAAGATCTTTCAGAATAGCTTCCACTGCATCACTACCTGTTCTGAACAAGTACCGTGCAAGACAAGATAAAAGTTCAGATGAAGAAAGTTCATCCCCATAA 2766 0.4725 MNLHIFIFFYLISLSLCHTAKAGTKSIISFRTFNESRPRRILHQPLFPDDSAPPPAAVESPPPPPPDTPSSPDIPFFHENPVGPTPDQNQPPPAIPNGITAVPNPTATTTTASKPTKKVAIAMSVGIVTLGMLSALAFFLYRHRVKHPSETQKLVNGNSQGINEDSSGGPPSSFLYIGTVEPTRAESVSEPVESNGGNKSPYHKLNPPKRSDRYRPSPELQPLPPLTKPPDGNYPPAISSSSSSSSSASDEESNDMAFHTPHGSSLSYEDGYYTPISRQSSLANGSPTVTARSETHSNNSHPFSKRTSPKSRFTVPSPDVRPVIIPSIKQAPPPPPPPLPPPPPETRSAPFQLVDKQVTSGASRRPKFSAPPPAPNLTHLQSTTDYTPQDTSRTSPKHPPPPPPPPPPPPLQTTPRKTVSPAISVPSSSASRKQQSWSASEGTDSVKSIKKVSDSEHADAKLVASSGRTEADDDMDGGKPKLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCNNSTNVVPKEAPRKLVLPPVNQEEKVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELFETLVKMAPTKEEEVKLKKYDGDLSKLGSAERFLKAVLDIPFAFKRVEALLYRANFDTEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGEGGDSSNENVQKKMNSKFNEDEFKKQGLQVVAGLGRDLSNVKKAATMDSDVLSSYVTKLEMGLEKVRSVLQYERSETKGNFFNSMKLFLRDAEEEIVRIKDDERKALFLVKEVTEYFHGDTAKEEAHPFRIFMIVRDFLNSLDQVCKEVGRMQDRIMVGAARSFRIASTASLPVLNKYRARQDKSSDEESSSP 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0194 921 MobiDBLite consensus disorder prediction 394 415 - -
Lele54g0194 921 MobiDBLite consensus disorder prediction 270 314 - -
Lele54g0194 921 MobiDBLite consensus disorder prediction 416 446 - -
Lele54g0194 921 MobiDBLite consensus disorder prediction 48 72 - -
Lele54g0194 921 MobiDBLite consensus disorder prediction 234 261 - -
Lele54g0194 921 SUPERFAMILY Formin homology 2 domain (FH2 domain) 400 883 - -
Lele54g0194 921 MobiDBLite consensus disorder prediction 151 477 - -
Lele54g0194 921 Pfam Formin Homology 2 Domain 478 870 IPR015425 -
Lele54g0194 921 MobiDBLite consensus disorder prediction 44 114 - -
Lele54g0194 921 MobiDBLite consensus disorder prediction 327 348 - -
Lele54g0194 921 MobiDBLite consensus disorder prediction 85 99 - -
Lele54g0194 921 SMART it6_source 472 885 IPR015425 -
Lele54g0194 921 ProSiteProfiles Formin homology-2 (FH2) domain profile. 472 896 IPR015425 -
Lele54g0194 921 MobiDBLite consensus disorder prediction 375 393 - -
Lele54g0194 921 Gene3D Formin, FH2 domain 477 882 IPR042201 -
Lele54g0194 921 PANTHER FORMIN-RELATED 8 915 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele54g0194 921 MobiDBLite consensus disorder prediction 151 173 - -
Lele54g0194 921 MobiDBLite consensus disorder prediction 447 477 - -
Lele54g0194 921 MobiDBLite consensus disorder prediction 218 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0194 Lele-ChrLele54 1654993 1658331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0194 39 911 FH2 protein (formin) Gene Family AT5G67470 58.561 0.0 873