Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0191 ATGTTTAGTATCTCAATATCTAGAGAGTTGATTTCTTTAAGACATAATTCTCATGTTTCTGTTGAATCTTTCATCTTCACACCTCCCAAGGAAGGAGACATTGAGACTATAATTAAAAAGGATAGTATGACAGACCCATTATGTGACCAAGAGTTATGCATTGGAATTGAAATTGTTTCGTTGCCTAATGTTTTGATCTTAGATAGGAGGTATCAGAGACAGAGCATACGATATTATTGGATGATGGAGACTTATTTACAAGAAAACTTTGAAGTCAAGTCCAAGAACTCATCTGAAGAGGTTCTTCAGAATTGGAGAAAACTTTGTGGGATTGTTAAGAACCCTAAAAGGAGGTTTCGTTTCACTGCCAATCTCTCCAAGCGAGGCGAAGCTGCTGAAATGCGTCGCACCAATCAGGAGAAATTAAGGGTTGCTGTTTTGGTTTCCAAAGCGGCATTTCAGTTTATCCAAGGTGTGCAACCAAGTGATTACACAGTACCTGAAGAAGTTAAAGAAGCAGGCTTTCAGATCTGTGCAGATGAATTGGAATCTATTGTCGAAAGACACGACATAAAGAAGCTAAAATTTCATGGTGGGGTTGATGGAATTTCAGAAAAGCTTTCAACTTCAACCGAGGATGGCATTAACAATGACTCCGACCTACTTATCAAGAGACAAGAAATCTACGGATTCAACAAATTCACCGAGAGTGAAGTCCGTAGTTTCTGGGTTTTTGTCTTCGAAGCCCTTCAAGACATGACGCTAATGATCCTAGGTGTGTGTGCTATTGTGTCTCTAGTAATTGGAATAGCGACAGAAGGATGGCCCAGAGGAGCTCACGATGGCCTAGGAATCGTCGTAAGTATCCTTCTGGTCGTGTTTGTGACAGCAACAAGTGATTATCGCCAATCATTACAGTTCAAGGATTTAGACAAGGAGAAAAAGAAGATTTCCATGCAGGTCACAAGAAATGGGTACAGAAAAAAAATTTCAATATATGAATTAGTTCCTGGCGACATTGTTCATCTTGCTATAGGAGATCAAGTCCCCACAGATGGACTCTTTGTTTCAGGATTCTCCGTGTTGATCGATGAATCAAGTTTAACCGGAGAAAGCGAACCAGTTATGGTGAATTCTCAGAACCCATTTCTTCTTTCTGGAACAAAGGTTCAAGATGGATCCTGCAAGATGTTAGTTACAACAGTAGGGATGAGAACTCAATGGGGTAAATTAATGGCGACATTGAGTGAAGGTGGAGATGATGAAACACCATTGCAGGTGAAACTTAATGGAGTTGCCACTATCATAGGGAAGATAGGCTTATTCTTCGCTGTTATTACCTTTGTCGTTTTGATGAAGGGATTTATGTCACGTAAACAACAAGAAGGAAGATTTTGGAGTGTGTCTGGGGACGACGCCATGGAGATGTTGGAATTCTTCGCTGTTGCAGTTACAATCGTTGTCGTTGCTGTCCCTGAAGGGTTACCATTAGCTGTGACACTGAGCCTTGCGTTTGCTATGAAGAAAATGATGAACGACAAGGCCCTTGTTCGACATTTAGCAGCCTGCGAAACCATGGGTTCCGCAACAAGTATTTGCAGTGACAAGACAGGCACGTTAACGACCAACCGCATGACTGTCGTCAAAACCTGCATTTGCATGAACACCAAGGAAGTGACCAATGATAACAGTAACAACAACGAGTTACCAGATTTTGCCATGAAAATGTTACTAGAGTCGATATTTAATAATACTGGAGGAGAAGTTGTAGCTAAAAGAAAACGCAGAAAGAAACGTGAGATTCTAGGGACGCCTACAGAAGCTGCAATATTGGAGTATGGTTTATCACTAGGAGGGGATTTTCAGAAAGAGAGAAAAGCATGTAAGATTGTGAAAGTTGAGCCATTTAACTCAGAAAAGAAAAGGATGGGTGTAGTTGTGGAGGTGCCTGAAGGAAAAATTCGAGCTCATTGCAAAGGTGCTTCTGAGATCGTTTTGGCTGCTTGTGACAAAGTGATTAATTCAAACGGAGATGTTGTGCAACTTGATGCAGAGAAAAGTAATTATCTTAAAGAAACGATTCACTCATTTGCTTGTGAGGCACTTAGAACTCTATGCCTTGCTTATGTGGAATTGGAAAATGGGTTCTCTGCTGAAGATCCTATTCCTACTTCTGGATATATTTGTATCGGAATTGTTGGTATCAAAGATCCTGTTCGTCCTGGTGTTAAGGAATCTGTTGCAACCTGTCGTAAAGCAGGTATTGCAGTTAGAATGGTTACAGGTGATAATATTAATACTGCTAAGGCTATAGCCAGAGAATGTGGGATTTTAACAGACGATGGTATAGCCATAGAAGGCCCTGATTTCAGAGAGAAGACTCAGGAGGAAATGTTTGAACTGATTCCTAAAATTCAGGTTATGGCTAGATCCTCACCATTAGATAAGCATACCTTAGTGAAACAATTGCGTACTACTTTTGGAGAAGTTGTAGCTGTAACTGGTGATGGAACAAATGACGCCCCTGCCCTTCATGAGGCAGACATTGGACTTGCGATGGGCATTGCTGGAACTGAGGTTGCTAAAGAAAGCGCTGATGTCATAATTCTGGATGATAATTTCTCTACTATAGTGACAGTGGCAAAATGGGGACGTTCAGTTTACATAAACATTCAAAAATTTGTACAGTTTCAGCTGACAGTTAATGTGGTTGCCTTACTTGTGAACTTCAGTTCAGCATGCACAACAGGAAGTGCGCCTCTTACGGCAGTTCAATTATTGTGGGTGAACATGATAATGGACACACTTGGAGCACTTGCGCTAGCAACTGAACAGCCAAACGATGAACTAATGAAGCGTTCACCAGTGGGAAGGCAGGGAAGTTTCATCAGCAATGTCATGTGGAGGAATATATTAGGTCAATCTCTGTATCAAGTCCTGGTGATATGGATTCTTCAGGCCAAAGGGAAATGGATCTTTGGAATGAAGGGTCCAGATTCTGATATGTTGTTAAACACACTTATTTTCAACTCATTTGTCTTCTGCCAGGTTTTCAACGAGATAAGCTCACGTGAGATGGAGGAAGTAGATGTATTTAAAGGCATATTGGATAATCATGTTTTCGTGGCTGTCATAAGTGTCACTGTTTTGTTTCAAATCATAATAGTTGAGTATTTAGGAACCTACGCTAACACCACACCCCTCGCTCCCATTTACTGGTTGTTTAGCGTTTTCATTGGATATTTTGGCATGCCCATTGCAGCTCACTTAAAGAAGATCCCTATCTGA 3288 0.4091 MFSISISRELISLRHNSHVSVESFIFTPPKEGDIETIIKKDSMTDPLCDQELCIGIEIVSLPNVLILDRRYQRQSIRYYWMMETYLQENFEVKSKNSSEEVLQNWRKLCGIVKNPKRRFRFTANLSKRGEAAEMRRTNQEKLRVAVLVSKAAFQFIQGVQPSDYTVPEEVKEAGFQICADELESIVERHDIKKLKFHGGVDGISEKLSTSTEDGINNDSDLLIKRQEIYGFNKFTESEVRSFWVFVFEALQDMTLMILGVCAIVSLVIGIATEGWPRGAHDGLGIVVSILLVVFVTATSDYRQSLQFKDLDKEKKKISMQVTRNGYRKKISIYELVPGDIVHLAIGDQVPTDGLFVSGFSVLIDESSLTGESEPVMVNSQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFVVLMKGFMSRKQQEGRFWSVSGDDAMEMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNRMTVVKTCICMNTKEVTNDNSNNNELPDFAMKMLLESIFNNTGGEVVAKRKRRKKREILGTPTEAAILEYGLSLGGDFQKERKACKIVKVEPFNSEKKRMGVVVEVPEGKIRAHCKGASEIVLAACDKVINSNGDVVQLDAEKSNYLKETIHSFACEALRTLCLAYVELENGFSAEDPIPTSGYICIGIVGIKDPVRPGVKESVATCRKAGIAVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFREKTQEEMFELIPKIQVMARSSPLDKHTLVKQLRTTFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACTTGSAPLTAVQLLWVNMIMDTLGALALATEQPNDELMKRSPVGRQGSFISNVMWRNILGQSLYQVLVIWILQAKGKWIFGMKGPDSDMLLNTLIFNSFVFCQVFNEISSREMEEVDVFKGILDNHVFVAVISVTVLFQIIIVEYLGTYANTTPLAPIYWLFSVFIGYFGMPIAAHLKKIPI 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0191 1095 Pfam E1-E2 ATPase 316 511 - -
Lele54g0191 1095 ProSitePatterns E1-E2 ATPases phosphorylation site. 535 541 IPR018303 -
Lele54g0191 1095 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 285 455 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele54g0191 1095 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 626 779 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele54g0191 1095 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 473 556 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele54g0191 1095 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 804 914 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele54g0191 1095 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 187 1095 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele54g0191 1095 Gene3D - 248 1081 - -
Lele54g0191 1095 Gene3D - 97 157 - -
Lele54g0191 1095 Pfam Cation transport ATPase (P-type) 591 672 - -
Lele54g0191 1095 PRINTS H+-transporting ATPase (proton pump) signature 834 850 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele54g0191 1095 PRINTS H+-transporting ATPase (proton pump) signature 690 708 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele54g0191 1095 PRINTS H+-transporting ATPase (proton pump) signature 866 891 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele54g0191 1095 FunFam Calcium-transporting ATPase 726 879 - -
Lele54g0191 1095 PRINTS P-type cation-transporting ATPase superfamily signature 858 870 - -
Lele54g0191 1095 PRINTS P-type cation-transporting ATPase superfamily signature 834 853 - -
Lele54g0191 1095 PRINTS P-type cation-transporting ATPase superfamily signature 533 547 - -
Lele54g0191 1095 PRINTS P-type cation-transporting ATPase superfamily signature 731 742 - -
Lele54g0191 1095 PRINTS P-type cation-transporting ATPase superfamily signature 753 763 - -
Lele54g0191 1095 PRINTS P-type cation-transporting ATPase superfamily signature 364 378 - -
Lele54g0191 1095 PANTHER CATION TRANSPORTING ATPASE 143 1094 - -
Lele54g0191 1095 CDD P-type_ATPase_Ca_PMCA-like 224 967 - -
Lele54g0191 1095 FunFam Calcium-transporting ATPase 851 1095 - -
Lele54g0191 1095 FunFam Calcium-transporting ATPase 97 157 - -
Lele54g0191 1095 SUPERFAMILY Calcium ATPase, transduction domain A 319 413 IPR008250 -
Lele54g0191 1095 FunFam Calcium-transporting ATPase 543 738 - -
Lele54g0191 1095 Gene3D - 543 738 IPR023299 GO:0000166
Lele54g0191 1095 FunFam Calcium-transporting ATPase 296 416 - -
Lele54g0191 1095 Gene3D - 224 416 - -
Lele54g0191 1095 Pfam Cation transporting ATPase, C-terminus 919 1092 IPR006068 -
Lele54g0191 1095 SUPERFAMILY HAD-like 532 939 IPR036412 -
Lele54g0191 1095 SFLD p-type atpase 515 886 IPR044492 -
Lele54g0191 1095 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 539 743 IPR023299 GO:0000166
Lele54g0191 1095 SUPERFAMILY Calcium ATPase, transmembrane domain M 197 1094 IPR023298 -
Lele54g0191 1095 Pfam Cation transporter/ATPase, N-terminus 197 265 IPR004014 -
Lele54g0191 1095 Pfam Ca2+-ATPase N terminal autoinhibitory domain 86 129 IPR024750 GO:0005516
Lele54g0191 1095 Gene3D - 530 879 IPR023214 -
Lele54g0191 1095 SFLD C1.7: P-type atpase like 515 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0191 Lele-ChrLele54 1634374 1640422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0191 82 1095 Primary Pumps ATPases AT4G37640 79.921 0.0 1679