Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0186 ATGGAGAAGCTTATTAAGCCAAGCGACAAGGAATTCATGAGGATGGCCATGTTAAAACATGAAGACACTTTCAGAGAGCAGGTATATGAACTCCATCGTTTGTACCGGATCCAGAAGATACTGATGAAGAATATGGAAAATGGAAGAGCTATTGAAGTAGCCCAACGAGAATGGAACTTGAAGAACGCGATTAGTTTAATTCGAACCACTAATCATCATAAAGATGCACAGAAAAAGCCTGAAATCAAATTTGATCTTGAACGGCCAGCGGAGGAGCACATTGATGAATCAGACGGCGATGAGGTAGAGATCATAGATGAGTCTGAGATTGAGCTGACACTAGGCCCCTCAAGTTATTACAACCGTAGAATGAAAGTTGATACAACACTAACTTCAGATTCGGGACATAGCTTGTCTTCTTCTTCAACTGGATCCAGCCAGATAAACAAGGCAGCAAGAGAAGACTCAAGTGGAATAAGAAACATTTGTGTTGATATTGAAGAACGATCAAGACAAGAGAGGCTAAAACAGCCACCTTGGCTTTTTCAAATGTTGAGTCTGAACATGACTTGA 573 0.4084 MEKLIKPSDKEFMRMAMLKHEDTFREQVYELHRLYRIQKILMKNMENGRAIEVAQREWNLKNAISLIRTTNHHKDAQKKPEIKFDLERPAEEHIDESDGDEVEIIDESEIELTLGPSSYYNRRMKVDTTLTSDSGHSLSSSSTGSSQINKAAREDSSGIRNICVDIEERSRQERLKQPPWLFQMLSLNMT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0186 190 PANTHER TRANSCRIPTION FACTOR, PUTATIVE (DUF863)-RELATED 7 173 - -
Lele54g0186 190 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0186 Lele-ChrLele54 1584662 1585318 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0341 49 2000892 2001623 Lele54g0186 54 1584662 1585318 CCT
Lele54g0186 54 1584662 1585318 Lele49g0337 49 1983071 1984309 CCT
Lele54g0186 54 1584662 1585318 Lele50g0356 50 2039847 2042098 CCT
Lele54g0186 54 1584662 1585318 Lele52g0362 52 2120908 2125134 CCT
Lele54g0186 54 1584662 1585318 Lele55g1302 55 19477412 19478068 hybridization
Lele54g0186 54 1584662 1585318 Lele56g1250 56 15841263 15842129 hybridization