Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0171 ATGGAATCTCAAATCCCAGAGAATTCAAACTCCAAGAGAATTCAAAAACTTCTTCCTTCGACGCCTACATGCACAAACCGTTCTTGTTTCTTCTGCAACATGTCTGAAACAGACCCTTTGGTCAAAAGAGCTAAAATCGCTCGTTGTCTCAAACGAATGCCTCTTAGGGATGACAAAGAACATGTCTTGGCCCTAAGCAGCATTTGGAGAATCGCCATGACTAAGCCAAACGACCCAGAATTTCCATGCTTGGGCATTTTCAGATGCATGGCCAAACTCATCCAAAAGGGTCTCAGAAATAAGGGTTGGCTTCTTAATTACCAGAACATTTACATCCCATATTACGCAGCTCATATCATTGGCTCTTATACCATGAACAAAGCTAAGTTTGCTGAAAAAGCAGTTAAATCCAACGTTGTTGGGCCATTAATCGAACTCCTACGAGGTAAGATCAGTTGGGTTGAACAGAGAGTTTCACTTCGAGCATTGGGTCACTTGGCAAGACATGAATCAACCTTTGAGGCTGTAGCAGAACAAGAGGAAGAAATCATACAAGTAGCCATTGACATAGCTTCCACGTGCCTGTGCGAGGTATATAATAAATTTGTTGGCTTGGAGGAATCCCAGAGATTGGAGTATCATAGGAATTTGCTAACAAGAGGGCTTGGAGGGTTAGAACTAGAGAACAGAAAAGCAGAGGAATGGGCCGGCCAACTTCAGTGTTGGTCCTTATATCTTTTAGATTGCTTTGCATGCAAAGAAAGATCTCTCAGATTAATCTGCAAGAAAGAGTTCTTGAAGGATCTGTGTAAAATGTGGGGTGGATTAGCGAACCCAAAATCTCCTTCTGGAATCGGACTTCTTCGAACTCTGTGTCGTACAAACATAGGAAGAGAAACTATAGCAGAAGTCGAGGATGTCGTAGAGAATCTCTGTCTTGTCTCAAGATCTTCAGATGATCGACAACACTTGGCCATCGATAGTCTTCTACAACTTCTCAAAGACCCAATCACAAGGTATAAAGTAATTGAAACTGTAGCTCCAGTTCTTGCTGATTTAGTTGAACTCAAAGGAGTCCAAGCGATTGAGCGAGTTCTGTTACAGGATTATCATAAAATCAAGTACTTTGAAACGAAGTTGAAGAGTGAGAAAGCTGAGAAAGCCTTAAGAGAGATATGGGATTTGAAGGTGGAGAGAGTAAAGATAGAGAGTCTAATGAGCGAGGAAGAAATCAGAGAGAGAGAGATATTGGCATATGTTCTGAAAAAAGAAGGGAATAAGAAGTTTAGGTCAGGGAAGGTTGAAGAAGCTGTGATGAAGTATTCAGAAGCCATTGATGTGTGTGGAGTGAAAGCGAGGAGAGAGAGGATAGTGCTTTACAGTAACAGAGCTCAGTGTTATTTGGTTCTTAGAGAGGCAGATGCCGCCATTAGAGATACTACTCGAGCTCTGAGTCTGTCGTCACACGTGGCATGTCGTCACAGTAAGAGCTTGTGGAGAAGATCGCAAGCTTATGACATGAAAGGCCTCGCTAAGGAAAGCTTGATGGATTGTTTAGCGTTCATCAGGAGCCGCTTCAGGTCTCAGAAGAAGACGAAGACGAAGAAGAGGTTCAAAATCCCATACTACGCGGCTCGCATGCTTAACAAGCAGATGAACGCCACGTGGCCTTTTGCTTCAGCCAAGTCAAAGAGGAGCATGATCAAACACGTAGATGAACTTGACGAGTTCAGGGGCCATCAGTATCATCAGGTTGGTGTAAAAACCATGAGGAGGATGACGACCAGGAAGAAGGAAGGTAGGCGAAGAAAGTCAGATAGGACAAGAACAAATGTTAGTCGACAAAGATTATGA 1854 0.4299 MESQIPENSNSKRIQKLLPSTPTCTNRSCFFCNMSETDPLVKRAKIARCLKRMPLRDDKEHVLALSSIWRIAMTKPNDPEFPCLGIFRCMAKLIQKGLRNKGWLLNYQNIYIPYYAAHIIGSYTMNKAKFAEKAVKSNVVGPLIELLRGKISWVEQRVSLRALGHLARHESTFEAVAEQEEEIIQVAIDIASTCLCEVYNKFVGLEESQRLEYHRNLLTRGLGGLELENRKAEEWAGQLQCWSLYLLDCFACKERSLRLICKKEFLKDLCKMWGGLANPKSPSGIGLLRTLCRTNIGRETIAEVEDVVENLCLVSRSSDDRQHLAIDSLLQLLKDPITRYKVIETVAPVLADLVELKGVQAIERVLLQDYHKIKYFETKLKSEKAEKALREIWDLKVERVKIESLMSEEEIREREILAYVLKKEGNKKFRSGKVEEAVMKYSEAIDVCGVKARRERIVLYSNRAQCYLVLREADAAIRDTTRALSLSSHVACRHSKSLWRRSQAYDMKGLAKESLMDCLAFIRSRFRSQKKTKTKKRFKIPYYAARMLNKQMNATWPFASAKSKRSMIKHVDELDEFRGHQYHQVGVKTMRRMTTRKKEGRRRKSDRTRTNVSRQRL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0171 617 Gene3D - 21 392 IPR011989 -
Lele54g0171 617 Gene3D Tetratricopeptide repeat domain 413 541 IPR011990 GO:0005515
Lele54g0171 617 MobiDBLite consensus disorder prediction 593 617 - -
Lele54g0171 617 SMART tpr_5 457 490 IPR019734 GO:0005515
Lele54g0171 617 SMART tpr_5 418 451 IPR019734 GO:0005515
Lele54g0171 617 SUPERFAMILY ARM repeat 88 369 IPR016024 -
Lele54g0171 617 SUPERFAMILY TPR-like 416 519 IPR011990 GO:0005515
Lele54g0171 617 MobiDBLite consensus disorder prediction 593 609 - -
Lele54g0171 617 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 21 601 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0171 Lele-ChrLele54 1462802 1464861 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0171 54 1462802 1464861 Lele49g0325 49 1921308 1924029 CCT
Lele54g0171 54 1462802 1464861 Lele51g0338 51 1936339 1939062 CCT
Lele54g0171 54 1462802 1464861 Lele55g1313 55 19585144 19586200 hybridization
Lele54g0171 54 1462802 1464861 Lele56g1264 56 15953287 15955343 hybridization