Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0165 ATGGCTTGTTATGATCCTGCTAATTGTGAGAACGACTTACAGGCTCTGCAATTCATAGAAGAAGTTTCCAGAGACGCCGCCTCCGTCCAGAGGAGAGTCCTGGCAGAGATTCTCACCCAAAACGCCGAAACTGAATACCTTAAACGGTTTCACCTCAACGGAGCCACCGAACTTGAAATCTTCAAATCCAAGGTTCCTGTCGTAACTTACGAGAATCTGCAGCCCGATGTCCAACGCATTGTCAATGGTGATCGCTCCCCCATCTTCTCCTCTCACCCAATCTCTGAGTTCCTCACCAGTTCTGGAACATCTGGTGGGGAGAGAAAACTGATGCCAACGATTGACGAAGAGATGGATCGTCGTCATCTATTGTTCAGCCTTCTCATGCCTCTGATAAAACAACATGTGCCAGATTTGGATAACTGGAAGGCTCTTCGGTTTTTGTTTATCAAGGCAGAGACGAAGACTCCAGGTGGAATAGTGGCACGACCAGCCAGCACAAGCTATTACACAAGCGAGCAATTCAAGAAGAGACCATTTGAATCGTACACAAGCCCCAACGAAGTCATAGAATGTACCGATTCTTTCCAGAGCATGTACACCCAGATGTTATGTGGTCTCATCATGCGACACGAAGTTCAACGTGTCGGAGCCATTTTCGCATCTGGGTTTCTAAGAGCTCTCAAATTCCTTCAAAATAACTACCAACAATTGGCCAACGACATCTCCACCGGGACTCTAAGCCCACAGATCACAGACGGTTCCATCAGAAAATGCATCGGTAACATCATGAATAAACCAGACCCTGAGCTCGCAGATTTCATCATCAGAGAATGTTCCAAAGAGAACTGGGAATGCATAATCACCAGAATTTGGCCTAATGCTAAGTACCTTGACGTTATTGTTACAGGTGCTATGGCTCAGTACATCCCAACTCTTGATTATTACAGTGGTGGCCTACCTCTTGTTTGTACCATGTACGCTTCTTCTGAATGCTTCTTTGGACCAAACCTCAGGCCGTTTTGCGACCCTTCTGAAGTTTCCTACTTGATCTTGCCAAACATGGGATACTTCGAGTTCTTGCCGATTGACGATGGATCATCATCTTCTGACCCGGTGGATCTAAGCGACGTTGAAGTCCGGAAGGAATACGAGCTGGTTATCACTACCTACGCCGGTCTGTGCCGGTACCGAGTCGGCGATGTTCTCCGAGTCACGGGGTTCCACAACTCGGCGCCGGAATTTCAGTTCGTGGGAAGAAGGAACGTTTTGTTGAGCATTGACTTGGACAAAACGGACGAGGCCGAGTTGCAAAAATCCGTTGACAATGCCTCGTTGCTTCTAAAAGAGTTCAACACTAGCGTAGTGGAGTATACAAGCTACGCCGACACTAAATCTTTGCCTGGACATTACGTGATTTACTGGGAACTGTTATCGAAGAAAGACAACCCGTCGGTTTGGCCCACCGATGAAATCTTGAACCGTTGCTGTCTCGCCATGGAGGAGTCGCTGAACGCTATGTACAGACAAGGAAGAGTTGCCGACCGGTCGATTGGACCGTTGGAGATAAGAGTGGTGAAGAACGGTACGTTTGAAGAGCTTATGGATTATGCGATCTCGAGAGGCGCGTCGATTAGTCAGTACAAAGCGCCGAGGTGTGTGAGCTCAACGCCGATTGTGGAACTGCTTGACTCGAGAGTGGTTTCAGTTCACTTCAGTCCATCAGCACCGCACTGGACGCCGGCGTCGGGAGGTCGCCGATTGGATTGA 1770 0.4842 MACYDPANCENDLQALQFIEEVSRDAASVQRRVLAEILTQNAETEYLKRFHLNGATELEIFKSKVPVVTYENLQPDVQRIVNGDRSPIFSSHPISEFLTSSGTSGGERKLMPTIDEEMDRRHLLFSLLMPLIKQHVPDLDNWKALRFLFIKAETKTPGGIVARPASTSYYTSEQFKKRPFESYTSPNEVIECTDSFQSMYTQMLCGLIMRHEVQRVGAIFASGFLRALKFLQNNYQQLANDISTGTLSPQITDGSIRKCIGNIMNKPDPELADFIIRECSKENWECIITRIWPNAKYLDVIVTGAMAQYIPTLDYYSGGLPLVCTMYASSECFFGPNLRPFCDPSEVSYLILPNMGYFEFLPIDDGSSSSDPVDLSDVEVRKEYELVITTYAGLCRYRVGDVLRVTGFHNSAPEFQFVGRRNVLLSIDLDKTDEAELQKSVDNASLLLKEFNTSVVEYTSYADTKSLPGHYVIYWELLSKKDNPSVWPTDEILNRCCLAMEESLNAMYRQGRVADRSIGPLEIRVVKNGTFEELMDYAISRGASISQYKAPRCVSSTPIVELLDSRVVSVHFSPSAPHWTPASGGRRLD 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0165 589 Pfam GH3 auxin-responsive promoter 19 556 IPR004993 -
Lele54g0165 589 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 14 576 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0165 Lele-ChrLele54 1413009 1414972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0165 10 573 EF-hand Containing Proteins AT1G23160 47.727 0.0 559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele51g0338 51 1936339 1939062 Lele54g0165 54 1413009 1414972 CCT
Lele49g0324 49 1911046 1913104 Lele54g0165 54 1413009 1414972 CCT
Lele54g0165 54 1413009 1414972 Lele55g1319 55 19630028 19631973 hybridization
Lele54g0165 54 1413009 1414972 Lele56g1269 56 15993385 15995348 hybridization