Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0161 ATGGAAACTCTTCGTATCTCCTTGTTTCCTTTCTTCTTCCTTCTTCATTTCTCCTCCGTCGCTTTAGCCTACACTGTTCCCGACAAGTATTTCCTCAATTGCGGGTCCCATGACAACGTAACCGACGGTGGTCAGCTTTTCGTCGGCGACTCTTCTGCTTCCGTCTGCCTTCCGAAGCAAAGCTCCGCCGTGAGAGAACAAAATAAATCGTCAACCTCACTTCCCCTGTATCAAACCGCGAGAAAGATTCATGTTCCATCTGGTTACAAGTTCACAGTCGACGAAAATGAAGGCGGGTATTATCTGGTACGTCTCCATTTCTATGCTTTCTCGTCTCCAGAAACTCTATCTGGAGCTCGATTCAATGTTTCGAGTGCGGGATTTTTGCTGTTGGAAAATTTCAGTGCCGAAAGTCAAGCAAACTCTGCTATAGTTAAGGAGTTTTATCTGAACATCGGTAGCAACAGAAGCTTGCAAATCGATTTTTTCCCATCAAATTTCGCATTTGTAAACGCCATAGAACTGTTCCATATCCCCGATAACTTCATCTCCAGCACGGCATCACATGTTACAAGCAAAGGAAAAACCAGTGATTACAAGAACATTCTGATCTCCTCGGCGTTAGCTACGAGTTACATGCTTGACGTTGGTAATGGTGGCTCTGAGGTAAACGATGTCTTGCGGAGAAGATGGGAAAAAGATGATAAATACGCTAAAAAAGGAAAAGCTTTATCTAGCTCTGTTGCTATTATGTTCGATAGAGAAGATGATAATGTTTCAGAACAAGATAGTGGCTTTCTTGCTGTGGTTTCCACTAATGTTATCGCCCCAGAAACTGTTTACCAGACAGCAAGAGTGATGACTTCAGATTCCGGCAACCGTAATGAATCTTTTAACGTATCATGGTCAATTCCGGTGAAGAGGAAAACGAGTTATTTCATTCGAGCTCACTTCTGTGACATTACCAGTATCGGCGATGGTCTTACATACTTCAATTTCTATATCTACGAGAACTTCACTTGGTCAGTCCGAACAGATAGTTGGAAGCCTTCTGTTCCTTTGTATCGTGATTTTGTTGTCGATTCTGATGATCATGGAAAATTAAGGATCAGCGTTGGCCCTGATGAAGCTTCCACTGTTAAAAATGCTTTCCTGAATGGTCTTGAAGTGATGCAAATCATTAAAACTCGAGCTCGATTAGCAGAAACCGAATACGAATGTAATAAGAAGAATGATCATCATAATCATAATTGTCTTCTTCCTCTAGTGTTGGGGCTTGGAGCATCATTGGCACTGGTTTGCATTATGGTAATTGGTCTCTGTTTGATCCGGAAATATGGGAAACCGAAGATTATTAGAACTACTCTGGATTGGGTTCCACTTTCAGTTAAAGGAGGAGGAAGTTCACAAGGCAAATATGGAATCAGCCATGGAGGCGGCTCATCTCTTGGTAGCTTAAAACTGGGACTTAAGATGTCTTTCAACGAGATTCAATCTGCAACAAACAATTTCCACACAAAAAGGATAATCGGAAAAGGTGGATTTGGGAATGTCTACAAGGGAATTCTCAAGAATGGTGTGAAAGTAGCTGTGAAGAGAAGTGAACCAGGATCATCATCATCGGGACAAGGATTCAAAGAATTTCAAACTGAAATCGTGGTCTTATCCAGAATTCGTCATCGTCATTTAGTTTCCTTAATTGGGTACTGCGATGAGAGGTCGGAGATGATTCTGGTTTATGATTACATGGAAAAAGGAACACTCAGAGATCACTTGTACAACTCAAATCTCCCAAGCTTGCCATGGAAACAGAGACTTGAAATCTGCATTGGAGCAGCAAGAGGTTTGAATTACCTTCATAAAGGAGCAGCTGGTGGAATCATTCATCGTGATGTGAAATCCACAAACATATTACTCGACGAAAACCATGTTGCTAAAGTTGCTGACTTTGGCCTCTCAAAAACAGGTCCTCTTGATCAACAACAACAAGCATATTTCATCACAGGTGTTAAAGGCACTTTTGGGTATCTCGATCCTGAATATTTCAGAACCCAACAGTTAACAGGAAAATCCGATGTTTACTCATTTGGGGTTGTTCTCCTGGAGGTGTTATGTGCAAGACCAGCGCTTGATCCTGCACTTGCATGGAACCAAGTGAACTTAGCTGAATGGGGAATGTTCTGTAAGCAAAGAGGGACCCTGGAACAGCTGATAGATCCAACGATAAAGCATCAAATAGATCAAAACTCACTGAGGAAATTTACGGAGACGGTGGGAAAATGTCTGGAAGAAGATGGGTGTGATAGGCCAATGATGAGTGATGTGTTGTGGGATTTGGAGTATTCACTTCAACTTCAGAGAGGTGCAAGACAGAGGAACTCATTGACTCAAGAGGATAATAATAATTCAAGTGCGGTTACAGCTTCAATTGAACTGTCCAATGTAAGACGTCTTCCTTCATTGTCAACAGAAGCAGAATCAGAAGTTATGTCGATTTTGAAGGATGATAGTGCAGTTCATTCTGTTTTCTCGATCTCGAATATTGATGCTATCAGATGA 2559 0.417 METLRISLFPFFFLLHFSSVALAYTVPDKYFLNCGSHDNVTDGGQLFVGDSSASVCLPKQSSAVREQNKSSTSLPLYQTARKIHVPSGYKFTVDENEGGYYLVRLHFYAFSSPETLSGARFNVSSAGFLLLENFSAESQANSAIVKEFYLNIGSNRSLQIDFFPSNFAFVNAIELFHIPDNFISSTASHVTSKGKTSDYKNILISSALATSYMLDVGNGGSEVNDVLRRRWEKDDKYAKKGKALSSSVAIMFDREDDNVSEQDSGFLAVVSTNVIAPETVYQTARVMTSDSGNRNESFNVSWSIPVKRKTSYFIRAHFCDITSIGDGLTYFNFYIYENFTWSVRTDSWKPSVPLYRDFVVDSDDHGKLRISVGPDEASTVKNAFLNGLEVMQIIKTRARLAETEYECNKKNDHHNHNCLLPLVLGLGASLALVCIMVIGLCLIRKYGKPKIIRTTLDWVPLSVKGGGSSQGKYGISHGGGSSLGSLKLGLKMSFNEIQSATNNFHTKRIIGKGGFGNVYKGILKNGVKVAVKRSEPGSSSSGQGFKEFQTEIVVLSRIRHRHLVSLIGYCDERSEMILVYDYMEKGTLRDHLYNSNLPSLPWKQRLEICIGAARGLNYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSKTGPLDQQQQAYFITGVKGTFGYLDPEYFRTQQLTGKSDVYSFGVVLLEVLCARPALDPALAWNQVNLAEWGMFCKQRGTLEQLIDPTIKHQIDQNSLRKFTETVGKCLEEDGCDRPMMSDVLWDLEYSLQLQRGARQRNSLTQEDNNNSSAVTASIELSNVRRLPSLSTEAESEVMSILKDDSAVHSVFSISNIDAIR 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0161 852 Gene3D Phosphorylase Kinase; domain 1 482 582 - -
Lele54g0161 852 SUPERFAMILY Protein kinase-like (PK-like) 488 780 IPR011009 -
Lele54g0161 852 CDD STKc_IRAK 510 780 - -
Lele54g0161 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Lele54g0161 852 PANTHER OS07G0166700 PROTEIN 491 786 IPR045272 GO:0004714|GO:0006468
Lele54g0161 852 ProSiteProfiles Protein kinase domain profile. 504 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0161 852 Pfam Malectin-like domain 32 393 IPR024788 -
Lele54g0161 852 Pfam Protein tyrosine and serine/threonine kinase 505 776 IPR001245 GO:0004672|GO:0006468
Lele54g0161 852 Gene3D Transferase(Phosphotransferase) domain 1 583 807 - -
Lele54g0161 852 Gene3D - 208 394 - -
Lele54g0161 852 Gene3D - 29 178 - -
Lele54g0161 852 FunFam receptor-like protein kinase FERONIA 474 582 - -
Lele54g0161 852 FunFam Receptor-like protein kinase FERONIA 583 802 - -
Lele54g0161 852 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Lele54g0161 852 SMART serkin_6 504 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0161 Lele-ChrLele54 1363683 1366241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0161 23 794 Receptor kinase-like Gene Family AT2G23200 45.295 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele54g0161 Malectin_like 2e-26 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0161 54 1363683 1366241 Lele55g1326 55 19714883 19719297 hybridization