Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0158 ATGAACATGGTCATTGATAGCAGGAAGGATATGGATCGGATCAAGGGCCCATGGAGCCCCGAAGAGGACGACGCCTTGCAGAAGCTGGTGGGAAAACATGGACCTAGGAATTGGTCCCTGATCAGCAAGTCCATTCCGGGTCGGTCCGGCAAGTCTTGTCGGCTCCGATGGTGCAATCAGCTTTCTCCTCAGGTGGAGCACCGACCCTTCTCTCCGGAAGAGGATGAGACTATTATTCGGGCTCATGCCCGATTCGGCAACAAGTGGGCAACCATAGCCCGGCTTCTATCGGGTCGAACCGATAACGCCATCAAGAACCACTGGAACTCCACCTTGAAGCGCAAGTGTGCGTCCATGATGGTGGATGAGACCGCCACTGGCGCCGGTGGATTCGACGGAAGTTTCAGCCCCCAGCCACTTAAGAGATCGGTGAGCGCCGGAGCTGCTATGCCTGTGTCGAACGGGTTTTACGTAAACCAGCAGCAGACACCGAGTAGCCCATCCGGATCCGACGTTAGCGATTCCAGTGTGCCGGTAGCTTCTTCTTCCCACGTTTACCGGCCTGTGGCGAGAACCGGCGGAGTTCAACCACCCGTAGAAACGACGTCGTCGTCGAATGAACCTACAACTTCATTATCCCTATCACCTCCTGGAGTGGACTCATCAGAAGTCTTGAATCGCGCTTCAGAGTCAACACACGCAGCTACGTTAGTGAATACTGTGCGTTTATTACCTGCAATGGTTTCAGCCGTGGCGTCCTCCGCAGCACCGCCGCTGCCTCCAGCGGGCGCAGCGATGTCGGTGCAGCAGCAGGTTCATTTAGGCCTAGGCCATCGGAGGAGCGGTGACGGCAGGTCATTGGCGTCACCGGCGGAAAACCCTAACCCTAATGGGGCGGCGCCATTCAATTTCAGTGCAGAGTTGCTAGCTGCGATGCAAGAGATGATAAAGACGGAGGTGAGGAGTTATATGGCGGGACTAGAAAAGAGGCAGCTAATGGATTTGCGAACGTTTCAGTGA 1020 0.5559 MNMVIDSRKDMDRIKGPWSPEEDDALQKLVGKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSPEEDETIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMMVDETATGAGGFDGSFSPQPLKRSVSAGAAMPVSNGFYVNQQQTPSSPSGSDVSDSSVPVASSSHVYRPVARTGGVQPPVETTSSSNEPTTSLSLSPPGVDSSEVLNRASESTHAATLVNTVRLLPAMVSAVASSAAPPLPPAGAAMSVQQQVHLGLGHRRSGDGRSLASPAENPNPNGAAPFNFSAELLAAMQEMIKTEVRSYMAGLEKRQLMDLRTFQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0158 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 65 IPR017930 -
Lele54g0158 339 MobiDBLite consensus disorder prediction 157 225 - -
Lele54g0158 339 PANTHER MYB PROTEIN-RELATED 15 196 - -
Lele54g0158 339 SMART sant 14 63 IPR001005 -
Lele54g0158 339 SMART sant 66 114 IPR001005 -
Lele54g0158 339 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele54g0158 339 MobiDBLite consensus disorder prediction 157 182 - -
Lele54g0158 339 Gene3D - 68 127 - -
Lele54g0158 339 MobiDBLite consensus disorder prediction 277 299 - -
Lele54g0158 339 MobiDBLite consensus disorder prediction 196 225 - -
Lele54g0158 339 CDD SANT 17 59 IPR001005 -
Lele54g0158 339 FunFam MYB transcription factor 15 66 - -
Lele54g0158 339 ProSiteProfiles Myb-like domain profile. 10 61 IPR001005 -
Lele54g0158 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 116 IPR017930 -
Lele54g0158 339 MobiDBLite consensus disorder prediction 1 21 - -
Lele54g0158 339 FunFam Transcription factor MYB44 69 115 - -
Lele54g0158 339 Pfam Myb-like DNA-binding domain 18 76 - -
Lele54g0158 339 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele54g0158 339 Gene3D - 14 66 - -
Lele54g0158 339 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0158 Lele-ChrLele54 1343603 1344622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0158 7 329 MYB Transcription Factor Family AT4G37260 49.080 3.95e-95 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele54g0158 Myb_DNA-bind_6 1.1e-17 CL0123