Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0156 ATGACTCTTCTGTGGAGATTTTTCCCACTTGTTTTTCTCGTTCTTGTTGCTGTAAATCCCTGTTTTGGATTAAACCGAGATGGTGTTTTGTTGCTTTCTTTGAAGTACTCTGTTTCGAATGATCCTCTGTTCGCGCCTGGAAGCTGGAATTACTTGGACGAGACTCCTTGTTCGTGGAACGGAGTTTCATGTCGAGCTGTTTCAGATGCAACGAATTCTTCTTCTGAGAATCGAGTGGTTGGTTTGGCTCTTCCGAATTCTCAGATTCTGGGTTCCATTCCTGACGATCTTGGTTTGATTGAGAATCTTCAAAGTCTCGACCTTTCTAATAATTCTCTCAATGGGTCTCTTCCTTCTACACTTTTCCAGGCTTCAAAGCTTAGGTTTCTTGATTTGTCTGACAATTTGATCTCCGGGGAGATTCCGGATTCCATAGTACAGCTTAGTAATCTTCAGGTTCTTAACCTCTCTGACAATGCATTGGCGGGAGAACTTCCGACTGGTCTTGGACAGATGCAGAATCTAACTGTTGTGTCGGTGAAGAATAATTACTTATCAGGTAGTCTTCCTAGTGGCTTTCGAACGACACAAGTTTTAGATCTATCTTCCAACTTGTTGAACGGATCTCTTCCTTCGGATTTTGGTGGGGACAGTTTCCGATACTTGAACATCTCCTTCAACAAATTTTCCGGGAAAATTCCAGAAAAATTCGCGTGGAAAATCCCCAGTAACTGTACACTTGACCTCTCCTTCAACAATCTCACCGGAGAGATCCCAGATTCCTCTGTTTTCTTGAACCACGATTCGGATTCATTTTCTGGGAATCCCGATCTTTGCGGAGAAGAAATCGACAATCCATGTCCCGTTTCATCGTCACCATCTCCTTCACCAAATGACACTTTTCCCACATCTCCTCCGGCATTCGCCGCATTGCCGAAGACAGATTCTCCGGCACCAAAATCAGGACACGGAACTTCTTCACAGCAAGACAAGACAGGACTAAGAAGAGGAACAATCGTAGGAATCGTCGTAGGCGACATAATAGGCATTGGCTTATTAGCTACGATATTCCTATACGTGTACCAATCAAAAAGAAGGAAGAACATGGACGACGACCTAAACAAGGAACCTATCCATGGGTCATCATCATCACCGTCGTCGTCGTATGAGTCAAAAGGGTTCAGAAGGTGGTCATGCCTGCGTAAAAAAACCGAAGAAGAATCATCATCAGAAACCACAAGCTCTTATGATAACGAAGTGGAAGCACAGAGACAAGAAGAATCATCGGAGAACAAAACAGGGACATTGGTGACGGTTGATGGGGAAAAAGAGATGGAGCTGGAGACACTTCTAAAGGCATCAGCTTTCATACTGGGTGCTACTGGTTCGAGCATAATGTACAAGGCGGTTCTCGAAGACGGCACCGTGTTAGCGGTTCGGAGAATCGGCGAGAGCGGTGTAGGCCGGTTCAAGGACTTCGAGACCCAAATCCGAGTCGTAGCCAAACTGGTTCATCCGAACCTGGTTCGAGTTCGAGGATTTTACTGGGGAAATCAAGAGAAGCTTATTATCTACGACTTCGTTCCCAATGGCAGCCTCGCCAACGTTCGCTACAGGAAAGTGGGTTCCTCGCCTTGCCATGTGCCTTGGGAATTAAGGCTGAAGATTGCTAGAGGGGTGGCACGTGGGCTAGCTTACCTCCACGACAAAAAGCACGTGCATGGAAATCTGAAGCCCAGCAACATTCTCTTGGCCCATGATATGGAGCCCAAGCTTGGAGACTTTGGGCTTGAGAAAATTGTAACAGGAGACACCAGTTATAAAGCTGGTGGCTCGGCCCGTATCTTCGGCAGCAAGAGATCCACGGCCTCACGGGATAGCTTTCAAGACATTAACTTTGGCCCTAGCCCAAGCCCAAGCCCTAGTGCTATAACAGGTGTCTCCCCTTACCATGCGCCAGAGTCATTCAGAAACCTGAAGCCTCACCCAAAGTGGGACGTTTACTCGTTTGGGATCATATTTTTAGAGCTCCTAACAGGGAAGCTTGTGGTTACTGATGAGATGGGCCAAGGCCCAGTGGGGATGTTGTTGGAGGATAAGAATCGGGCCTTGCGGATGGCTGACGTGGCAATCCGTGCTGACATGGAGGGTAAAGAGGAGGCCTTGTTGGCTTACTTCAAATTAGGGTATAGTTGTATGTCGAGTGTCCCACAAAAAAGGCCATCAATGAAAGAAGTGTTGTATGCCCTTGATAAAATCACCAGCTCCTTTTCTTCCTCCTCCTCGGGATGTTATTATTATGGTCACTAA 2310 0.4658 MTLLWRFFPLVFLVLVAVNPCFGLNRDGVLLLSLKYSVSNDPLFAPGSWNYLDETPCSWNGVSCRAVSDATNSSSENRVVGLALPNSQILGSIPDDLGLIENLQSLDLSNNSLNGSLPSTLFQASKLRFLDLSDNLISGEIPDSIVQLSNLQVLNLSDNALAGELPTGLGQMQNLTVVSVKNNYLSGSLPSGFRTTQVLDLSSNLLNGSLPSDFGGDSFRYLNISFNKFSGKIPEKFAWKIPSNCTLDLSFNNLTGEIPDSSVFLNHDSDSFSGNPDLCGEEIDNPCPVSSSPSPSPNDTFPTSPPAFAALPKTDSPAPKSGHGTSSQQDKTGLRRGTIVGIVVGDIIGIGLLATIFLYVYQSKRRKNMDDDLNKEPIHGSSSSPSSSYESKGFRRWSCLRKKTEEESSSETTSSYDNEVEAQRQEESSENKTGTLVTVDGEKEMELETLLKASAFILGATGSSIMYKAVLEDGTVLAVRRIGESGVGRFKDFETQIRVVAKLVHPNLVRVRGFYWGNQEKLIIYDFVPNGSLANVRYRKVGSSPCHVPWELRLKIARGVARGLAYLHDKKHVHGNLKPSNILLAHDMEPKLGDFGLEKIVTGDTSYKAGGSARIFGSKRSTASRDSFQDINFGPSPSPSPSAITGVSPYHAPESFRNLKPHPKWDVYSFGIIFLELLTGKLVVTDEMGQGPVGMLLEDKNRALRMADVAIRADMEGKEEALLAYFKLGYSCMSSVPQKRPSMKEVLYALDKITSSFSSSSSGCYYYGH 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0156 769 ProSiteProfiles Protein kinase domain profile. 452 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0156 769 CDD STKc_IRAK 458 753 - -
Lele54g0156 769 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Lele54g0156 769 SMART LRR_typ_2 100 124 IPR003591 -
Lele54g0156 769 SMART LRR_typ_2 148 172 IPR003591 -
Lele54g0156 769 Gene3D Transferase(Phosphotransferase) domain 1 528 763 - -
Lele54g0156 769 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 81 752 - -
Lele54g0156 769 SUPERFAMILY L domain-like 27 280 - -
Lele54g0156 769 MobiDBLite consensus disorder prediction 395 410 - -
Lele54g0156 769 PRINTS Leucine-rich repeat signature 148 161 - -
Lele54g0156 769 PRINTS Leucine-rich repeat signature 103 116 - -
Lele54g0156 769 FunFam Leucine-rich repeat receptor-like protein kinase 194 289 - -
Lele54g0156 769 Gene3D Ribonuclease Inhibitor 24 194 IPR032675 -
Lele54g0156 769 Gene3D Ribonuclease Inhibitor 195 289 IPR032675 -
Lele54g0156 769 ProSiteProfiles Leucine-rich repeat profile. 126 148 IPR001611 GO:0005515
Lele54g0156 769 MobiDBLite consensus disorder prediction 378 393 - -
Lele54g0156 769 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Lele54g0156 769 ProSiteProfiles Leucine-rich repeat profile. 102 124 IPR001611 GO:0005515
Lele54g0156 769 FunFam Leucine-rich repeat receptor-like protein kinase 24 191 - -
Lele54g0156 769 SUPERFAMILY Protein kinase-like (PK-like) 457 750 IPR011009 -
Lele54g0156 769 MobiDBLite consensus disorder prediction 275 332 - -
Lele54g0156 769 Pfam Protein kinase domain 458 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0156 769 MobiDBLite consensus disorder prediction 371 438 - -
Lele54g0156 769 Gene3D Phosphorylase Kinase; domain 1 415 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0156 Lele-ChrLele54 1314837 1317952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0156 10 769 Receptor kinase-like Gene Family AT4G37250 58.559 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele54g0156 Pkinase 9.3e-31 CL0016