Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0152 ATGGAGCCAGCATCTGCGGATTCATCATCTCAACCTACCAATTCAGCTCCCAATATTGAGCATCATTCCACGAATGTTTCTGGACAAAATGACAATGCCGGTAACCCTGCGCCCTCATCGGCTACTGACAAATCATCCTCGGTGACGAATCTGAAATTTTCACAGTCCTTTGGAGTAAGAAAAGGGAACTCCCAGACTGGAGGTACTGGGATGTCAAGTTTTTCTTTCCTTACCAGTGGGCTTGGACGAGTGCTATCAATGCCTTCTGCTCGAAATGAGACTGCTCCTGTCAATTCAGGAGCTGAGAAGCCTAATTTAATTGAATCATTCACCAAAGGGTTAGTTGACTCATCAAAGACTGCAGTAAAGAAGATGCAGGTGAAGGCACGCCATGTTGTCTCTCAAAACAAACGTAGATACCAGGATGAAGAGTTCGATTTGGATCTGGCATACATTACCGAAAATATAATTGCTATGGGATTTCCAGCTGGTGATTCCAGCTCTGGAGTTTTCGGATATATTGAGGGTTTTTATCGCAATCACATGGAAGAAGTGATTAGATTTCTCGAGACTCGTCATGAGGGAAAGTACAAAGTATACAATCTTTGCTCGGAGAGGTTGTATGATGCATCACTATTCAAGGGGAAGGCTGCAAGTTTCCCATTTGATGATCATAATTGCCCTCCTATTGAACTTATAGCATCATTTTGTAGAAGTGCATATTCATGGTTAAAGGAGGATATTCAGAATGTGGTAGTTGTTCATTGCAAAGCTGGCATGGGGAGGACAGGGGTGATGATTTGTAGCCTTCTTTTGTTTCTTAAGTTCTTCCCAACCGCTGAGGAGGCCATTAATTGCTTTAACCAGAAAAGATGCATTGATGGGAAAGCTCTAGTTCTTCCTAGTCAGATTAGGTATGTTAAATACTTTGAACGGACTTTAACATACTTCAAAGGAGAAGTTCAGCCTGGACGGAGGTGCATGCTAAGAGGATTTCGGCTTCACAAATGCCCTTATTGGATTAGGCCTTCCATTACGATTTCTGATCATAATGGAATTCTTTTCACCACAAAAAAGCATCCAAAAACAAAGGATCTGATGCCGGAAGATTTTTGGATCAGTGCTCCGAAGAAAGGAATTGTAGTATTTGCGTTACCTGGGGAACCTGGTCTAACTGAGATGGCTGGGGACTACAAAATTTATTTTAGTGATGGACAAGGAGATTTCTACTGTTGGTTAAATACAACCATGACAGAAAACAGAAAAATCTTGGACGCCTCGGATCTTGATGGTTTTGACAAGAGAAAGATCCCTGCTCCAGGATTTCAGGTCGAAGTAGTAATGGCGGACTATAACGGCACCCTACCTGCTCTGACAAAAGCCAATCCTCCCGCCAGCAAAGGATCTAGTGGTAACACAGGCAATGTCGAAGCCTCACATACGACACTTGCTTCTGATTCAAGAAATAGTAAGGTTCCTACAAATGGGGATGATGATGTGTTCTCAGATGGTGAAGGAGAGGAGACCAAAGATTCAGAGAGCAGGGAATCTAAAGCTGCATCTGATGCCGCCACTTCAGACCATGTTGGAACATTGACCTCAGGGACAAAGCAGCTGTCACTTCAGAAACAAGAAAGTAAACAAAAGAATGCTTCTGAAGAAGTGTCAAATAGTCCGAAAATCCAGAAAACCCCCAAGACCCCTAGAAGTGAGTATGCTGGTGCAGATGAGATCAAGGCCATGGCAGCCGATGCTTCAGTTTTTTCTTTTGCAGATGATGAAGATTTTGAAAGTGACTGA 1800 0.43 MEPASADSSSQPTNSAPNIEHHSTNVSGQNDNAGNPAPSSATDKSSSVTNLKFSQSFGVRKGNSQTGGTGMSSFSFLTSGLGRVLSMPSARNETAPVNSGAEKPNLIESFTKGLVDSSKTAVKKMQVKARHVVSQNKRRYQDEEFDLDLAYITENIIAMGFPAGDSSSGVFGYIEGFYRNHMEEVIRFLETRHEGKYKVYNLCSERLYDASLFKGKAASFPFDDHNCPPIELIASFCRSAYSWLKEDIQNVVVVHCKAGMGRTGVMICSLLLFLKFFPTAEEAINCFNQKRCIDGKALVLPSQIRYVKYFERTLTYFKGEVQPGRRCMLRGFRLHKCPYWIRPSITISDHNGILFTTKKHPKTKDLMPEDFWISAPKKGIVVFALPGEPGLTEMAGDYKIYFSDGQGDFYCWLNTTMTENRKILDASDLDGFDKRKIPAPGFQVEVVMADYNGTLPALTKANPPASKGSSGNTGNVEASHTTLASDSRNSKVPTNGDDDVFSDGEGEETKDSESRESKAASDAATSDHVGTLTSGTKQLSLQKQESKQKNASEEVSNSPKIQKTPKTPRSEYAGADEIKAMAADASVFSFADDEDFESD 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0152 599 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 115 565 - -
Lele54g0152 599 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 291 IPR000387 GO:0016311|GO:0016791
Lele54g0152 599 CDD PTP_PTEN 148 312 IPR045101 GO:0016791
Lele54g0152 599 ProSiteProfiles Phosphatase tensin-type domain profile. 138 317 IPR029023 -
Lele54g0152 599 ProSiteProfiles C2 tensin-type domain profile. 324 451 IPR014020 -
Lele54g0152 599 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 151 318 IPR029021 -
Lele54g0152 599 SMART PTEN_C2_2 322 450 IPR014020 -
Lele54g0152 599 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 123 320 - -
Lele54g0152 599 MobiDBLite consensus disorder prediction 507 522 - -
Lele54g0152 599 Pfam Protein-tyrosine phosphatase 224 276 IPR000242 GO:0004725|GO:0006470
Lele54g0152 599 MobiDBLite consensus disorder prediction 524 565 - -
Lele54g0152 599 MobiDBLite consensus disorder prediction 1 48 - -
Lele54g0152 599 Gene3D Protein tyrosine phosphatase superfamily 123 320 IPR029021 -
Lele54g0152 599 MobiDBLite consensus disorder prediction 463 496 - -
Lele54g0152 599 MobiDBLite consensus disorder prediction 459 573 - -
Lele54g0152 599 ProSitePatterns Tyrosine specific protein phosphatases active site. 254 264 IPR016130 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0152 Lele-ChrLele54 1287333 1293006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0152 40 599 Protein tyrosine phosphatase (PTP) family AT3G19420 62.674 0.0 718