Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0146 ATGACTCATCCCAAAACTCTCTTTATTCTCTTCTTCTGCTTCACTCTCTTCACCACCGTCCTCTCCTATCAATCTTCTCCGGCTTCCTCCAAACTCCTCCTCTCCTCCGACGCCGTTTCTTTGCTCTCTTTCAAGTCCAAAGCCGACCTCAACAACAAGCTCCTCTATTCCCTTCATGAGAGCTTCGATTACTGTCAATGGCAAGGAGTCAAGTGCGCACAGGGCCGAGTGGTTCGTTACTACCTTCATGGCTCTGGCCTTCGCGGCGTCTTCGCTTCCCATACCCTCTCTCGCCTCGACCAGCTTCGAGTCCTCTGCCTCCGTAATAACTCCCTCTCCGGTCCCATCCCCGATCTCTCTCCCCTCTTCAACCTCAAGGCTCTGCTTCTCGACCATAATTCCTTCACTGGTTCTTTACCTCCCTCGTTTCTTCTGCTTCATCGCCTCCGTACTCTTTCTCTCTCTTATAACAACCTCACCGGTTCAATCCCTGTCGGGTTAGTTAATTTGGACCGTTTAGTTACCCTCCGCCTTGACTCGAACCGCTTTGATGGAACCGTTCCGCCGTTGAACCAGTCGTCCCTTCTTATCTTCAATGTCTCCGGCAATAACCTCACAGGGCCGATTCCGGCAACTCTCGCTCTTGCCCGATTCCACACGGCGTCGTTTTCGGGGAATCCGGGACTATGCGGGGACATTATTTCCAAAGCATGTGTTCATCCTAGGCCTCGAATCTTTGGTTCTTCTTCCAATGCCTCTGTCTCCTTGGGGCAAAGCGCGGAATCACAGAGCAACATCGACGTTTCTTCGCTGACTAGTAAGAAGCACAAGACTAACGGCCTGATTCTTGGGTCAACCATTGATTCTGTTTCCCTATACCCAAGTCCCAAAAGGTCCTCAGTACAGTATCATACCCACAATTACGGAAGTGAAATCGTGATCTATGGGTTTTCAGATTGGGGCGTCTGTTCAAGATCGGCAAGAGCGAAGCCTCTTCACTGGACATCATGCTTAAAGATAGCTGAAGACATAGCTCATGGACTTGCATATATACACCAAACATCAAGATTAATCCATGGCAACTTGAAGTCCTCTAATGTGCTCCTTGGGGTAGACTTTGAAGCTTGTGTTACAGACTATAGTTTGTTCCTCCTTGCAGACTCTTCATCCAGGGATGATCCTGATTCTGCTGCCTATAAAGCACCTGAAACTCGCAACACTAATCGCCCCCCTACTTCTAAATCTGATGTCTATACATTTGGGGTGCTTCTTCTGGAGCTTCTAACTTCTAAATACCCTTCTCAGCATCCTTTCCTTGTGCCCATGGATTTGCAGGGTTGGGTCAGAGCAATGAGGAACGACTATGGTGCTGAAGATAAGCAACTAGGAATGCTCACAGAGGTTGCAAGTATTTGCACTGTTATATCACCTGAGCAGAGACCAGCTATGTGGCAACTCTTGAAGATGATACAAGAAATAAAGAAGAGTGTAATACTTGGAGACTTTGTTGACAGAGAGGGCCCAGTAACAATAAAGAAAGCTGGTGGATTTCACCGTGCATCTTCTTCCTGTGGGCACAAGCCCAGCTCCAGACTGTGA 1599 0.4841 MTHPKTLFILFFCFTLFTTVLSYQSSPASSKLLLSSDAVSLLSFKSKADLNNKLLYSLHESFDYCQWQGVKCAQGRVVRYYLHGSGLRGVFASHTLSRLDQLRVLCLRNNSLSGPIPDLSPLFNLKALLLDHNSFTGSLPPSFLLLHRLRTLSLSYNNLTGSIPVGLVNLDRLVTLRLDSNRFDGTVPPLNQSSLLIFNVSGNNLTGPIPATLALARFHTASFSGNPGLCGDIISKACVHPRPRIFGSSSNASVSLGQSAESQSNIDVSSLTSKKHKTNGLILGSTIDSVSLYPSPKRSSVQYHTHNYGSEIVIYGFSDWGVCSRSARAKPLHWTSCLKIAEDIAHGLAYIHQTSRLIHGNLKSSNVLLGVDFEACVTDYSLFLLADSSSRDDPDSAAYKAPETRNTNRPPTSKSDVYTFGVLLLELLTSKYPSQHPFLVPMDLQGWVRAMRNDYGAEDKQLGMLTEVASICTVISPEQRPAMWQLLKMIQEIKKSVILGDFVDREGPVTIKKAGGFHRASSSCGHKPSSRL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0146 532 SUPERFAMILY L domain-like 38 231 - -
Lele54g0146 532 FunFam Probable inactive receptor kinase At5g67200 36 146 - -
Lele54g0146 532 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 289 - -
Lele54g0146 532 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
Lele54g0146 532 Gene3D Transferase(Phosphotransferase) domain 1 323 501 - -
Lele54g0146 532 FunFam Leucine-rich repeat receptor-like protein kinase 148 240 - -
Lele54g0146 532 Gene3D Ribonuclease Inhibitor 147 240 IPR032675 -
Lele54g0146 532 Pfam Protein tyrosine and serine/threonine kinase 328 488 IPR001245 GO:0004672|GO:0006468
Lele54g0146 532 SUPERFAMILY Protein kinase-like (PK-like) 326 494 IPR011009 -
Lele54g0146 532 MobiDBLite consensus disorder prediction 389 413 - -
Lele54g0146 532 ProSiteProfiles Protein kinase domain profile. 240 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0146 532 Gene3D Ribonuclease Inhibitor 37 146 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0146 Lele-ChrLele54 1249176 1253029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0146 273 501 Receptor kinase-like Gene Family AT3G50230 50.209 1.06e-66 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele54g0146 PK_Tyr_Ser-Thr 1.6e-16 CL0016