Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0141 ATGTGGGATCTTAACGACTCGCCTGATGATAGGATAAACAACAACGAATCAGAAGGCTGTTCTTCGCTGAATGATGATAAAGGAAAGCGGGTCGATGGATCTGTTTCCAATTCAAGTTCATCCGCGTTGGTCATGGAGGACGGATCCGCCGATGAAGACGGCGAGGGAATCCGAGGAATATCAGACGGGAAAGATACCAACAAGAAGATGAAGATGAGGAATAATAAAAAGAATAAGCGAAGCAGTAAGATATTCGGGTTCTGTGTGACCCATGAAGACGCATCTATGGATAGTGGGGAAGTCGCAGAACCACCCGTAATAACCAGACAGTTCATACCGGTGGAGGAGGCTGACGATGTCGCCGGCGCCGCCACCAGCTCATCCTTCCCTCGCTCTCACTGGGTGGGCCTAAAATTTGACCAATCAGAAGCAAACGGCGTCGGTGGCATGAAGTCAGTTGAAGTAGTGTCGCCGACGTCGTCGCTGCCGATGATTAAGAAAAGCCGGCGAGGACCACGGTCGAGAAGCTCCCAGTATAGAGGAGTCACCTTTTACAGAAGAACCGGTCGGTGGGAGTCTCACATATGGGATTGTGGAAAACAAGTCTATCTGGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCGGCCATTAAGTTCCGAGGGGTTGAAGCAGACATAAACTTCAACATAGAAGACTATGAAGAAGACTTGAAACAGATGGGCAATCTGACGAAGGAAGAGTTCGTGCACGTACTTCGCCGACAAAGCACTGGGTTTCCGAGAGGAAGCTCCAAATATAGAGGTGTCACTTTACACAAGTGTGGACGATGGGAAGCTCGAATGGGCCAATTTCTAGGCAAAAAGTACGTTTATCTGGGTCTATTTGACACCGAGATTGAAGCTGCTAGGGCTTATGACAAAGCAGCAATAAAGTGCAACGGCAAAGACGCCGTCACCAATTTTGATCCAAGCATCTATGAAAATGAGCTTCATTCTGAGTCTCCAGGTAATAACTCTGATCATCACAATCTGGATCTAAGTCTGGGCAATACGACGATGAGCTCAGATAATAATCATAGTGCTTCGCAATCATTGGTGAATCGGTTACCAGAACAAGAAGGTACTAAGAGAAGTAACAACATAGAATCTCATCATAGAAGCGGGGAGAGTGAAACGCTGCGTCTTCTGAGTCAAACTCATCAATATTCTGACGAAACCCACCACCATAACAGATATGGTCCTTACATGACTTCTGGACAACAACCTAAAATTCTTCACCATCTCCCACATTTTCACCACCAAAATTATCGTATTCCTAGCAGGAGTAATGGAAACGCTGGTCGTTTGGGAAGTGATCTTTCGTTGTCGATGAATGAAGATCAAGAACAACAGCGGCAATCTGGGCATTCTCATCATCAATATTTCTCGACTATGACTGCTGCAGCAGCATCATCAGGATTCCCACAGCAGATCACAACTACCTCAGAAGCTTGGCTGCAGAAAAATGGGTTCCACACTTCTCTCATGAGACCCTAA 1551 0.4655 MWDLNDSPDDRINNNESEGCSSLNDDKGKRVDGSVSNSSSSALVMEDGSADEDGEGIRGISDGKDTNKKMKMRNNKKNKRSSKIFGFCVTHEDASMDSGEVAEPPVITRQFIPVEEADDVAGAATSSSFPRSHWVGLKFDQSEANGVGGMKSVEVVSPTSSLPMIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMGNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKDAVTNFDPSIYENELHSESPGNNSDHHNLDLSLGNTTMSSDNNHSASQSLVNRLPEQEGTKRSNNIESHHRSGESETLRLLSQTHQYSDETHHHNRYGPYMTSGQQPKILHHLPHFHHQNYRIPSRSNGNAGRLGSDLSLSMNEDQEQQRQSGHSHHQYFSTMTAAAASSGFPQQITTTSEAWLQKNGFHTSLMRP 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0141 516 MobiDBLite consensus disorder prediction 51 69 - -
Lele54g0141 516 MobiDBLite consensus disorder prediction 332 426 - -
Lele54g0141 516 FunFam AP2-like ethylene-responsive transcription factor 269 329 - -
Lele54g0141 516 SUPERFAMILY DNA-binding domain 177 235 IPR016177 GO:0003677
Lele54g0141 516 SUPERFAMILY DNA-binding domain 269 329 IPR016177 GO:0003677
Lele54g0141 516 MobiDBLite consensus disorder prediction 332 379 - -
Lele54g0141 516 ProSiteProfiles AP2/ERF domain profile. 178 234 IPR001471 GO:0003700|GO:0006355
Lele54g0141 516 FunFam AP2-like ethylene-responsive transcription factor 177 236 - -
Lele54g0141 516 Gene3D AP2/ERF domain 269 328 IPR036955 GO:0003700|GO:0006355
Lele54g0141 516 Gene3D AP2/ERF domain 177 236 IPR036955 GO:0003700|GO:0006355
Lele54g0141 516 SMART rav1_2 270 333 IPR001471 GO:0003700|GO:0006355
Lele54g0141 516 SMART rav1_2 178 240 IPR001471 GO:0003700|GO:0006355
Lele54g0141 516 CDD AP2 178 235 IPR001471 GO:0003700|GO:0006355
Lele54g0141 516 MobiDBLite consensus disorder prediction 1 78 - -
Lele54g0141 516 ProSiteProfiles AP2/ERF domain profile. 270 327 IPR001471 GO:0003700|GO:0006355
Lele54g0141 516 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 104 430 - -
Lele54g0141 516 Pfam AP2 domain 178 226 IPR001471 GO:0003700|GO:0006355
Lele54g0141 516 Pfam AP2 domain 269 318 IPR001471 GO:0003700|GO:0006355
Lele54g0141 516 PRINTS Ethylene responsive element binding protein signature 271 282 IPR001471 GO:0003700|GO:0006355
Lele54g0141 516 PRINTS Ethylene responsive element binding protein signature 309 329 IPR001471 GO:0003700|GO:0006355
Lele54g0141 516 MobiDBLite consensus disorder prediction 380 396 - -
Lele54g0141 516 CDD AP2 269 329 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0141 Lele-ChrLele54 1207370 1209997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0141 1 516 AP2-EREBP Transcription Factor Family AT4G36920 52.256 3.12e-128 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele54g0141 AP2 3.6e-10 CL0081