Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0139 ATGTGCTCACATAGCAAATGCAGAGCACCTTCCATTGGCTTTGGCTTCCTCTTTCTTTCACTCTTCTCTTTACTCTTCACCACTTCCTTTGCCTGCTCTAACGGCAATTGCCAGGTTCTGGAGCCATGTTCGCTGGCTACAGATTGCGGGTCAGGTCTCTATTGTGGCAACTGCCCTGCTCTGGGTAGGGCTCAACCTGTCTGCACCAGAGGTCAAGCCACCATTCCTACAGCTATAATTAGTGACTTGCCATTCAACAAGTACACGTGGATTGTCACTCACAATTCATTCAGCATCGTTGATGCACCGCCTTTGCCGGGCGTTCAGAGGCTAACACTTTACAATCAAGAAGATACTGTGACTAACCAGTTGAAGGGGTTGACTAATCTATTCACTAATGCTGGGCTGGATAAATATTGGTTTCCTTTGTCTAAGATGCCAAAAAAGGGTCAAGATTGGCCCACTGTAGCAGAAATGGTTCAAGCAAATCACCGTCTTCTTGTTTTTACTTCTGTTGCTTCAAAGGAAGCCGAAGAAGGAATAGCTTATCAGTGGAAGTATATGATTGAAAATGAGTCTGGAGATCCTGGAGTTCAACCAGGGTCTTGCCCACATAGAAAAGAATCAAAGCCTCTGAATTCTAAGAGTGTATCACTTTTCTTGGAGAATTACTTTCCAACATATCCAGTTCAAGCGGATTCGTGCAAGGAGCATTCAGCTCCACTTGCAGAGATGGTGAATACATGTTACAAAGCTGCAGGGAATGTGCTTCCCAATTTTGTAGCAGTTAATTTTTACATGAGGAGCGATGGAGGTGGTGTTTTTGATATTGTGGATAAAATGAATGGGCACTCATTGTGTGGGTGCAGTACAGTCACCGCTTGCCAGTGTGTTTGGGCTGGAGCGCCTTCTGGTTCTTGCAAGAACATTGCAATGCCTAGTACAAATCCAGTGGGCAATGCTGCTGGAAGCTCTGGAAGCTTTAGTGGATCTGTTCAATTCTCTAATTCAGCTTCTGCTTTCTGTCATCCAAATTGGATGCTTCCCCTCTTGTATTTTCCATTTATTTTTGCAGCTTTGTTACAGCTGTCATGA 1095 0.4447 MCSHSKCRAPSIGFGFLFLSLFSLLFTTSFACSNGNCQVLEPCSLATDCGSGLYCGNCPALGRAQPVCTRGQATIPTAIISDLPFNKYTWIVTHNSFSIVDAPPLPGVQRLTLYNQEDTVTNQLKGLTNLFTNAGLDKYWFPLSKMPKKGQDWPTVAEMVQANHRLLVFTSVASKEAEEGIAYQWKYMIENESGDPGVQPGSCPHRKESKPLNSKSVSLFLENYFPTYPVQADSCKEHSAPLAEMVNTCYKAAGNVLPNFVAVNFYMRSDGGGVFDIVDKMNGHSLCGCSTVTACQCVWAGAPSGSCKNIAMPSTNPVGNAAGSSGSFSGSVQFSNSASAFCHPNWMLPLLYFPFIFAALLQLS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0139 364 PANTHER UNCHARACTERIZED 45 125 - -
Lele54g0139 364 SUPERFAMILY PLC-like phosphodiesterases 77 286 IPR017946 GO:0006629|GO:0008081
Lele54g0139 364 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0139 Lele-ChrLele54 1176657 1180197 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0299 50 1744524 1751336 Lele54g0139 54 1176657 1180197 CCT
Lele52g0308 52 1812195 1819129 Lele54g0139 54 1176657 1180197 CCT
Lele54g0139 54 1176657 1180197 Lele55g1350 55 19923447 19926956 hybridization
Lele54g0139 54 1176657 1180197 Lele56g1296 56 16222548 16226190 hybridization