Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0135 ATGTATGTAATGGACTATTGGGGTTTTTGGCATTTGTCAGCTTCAGTTACCGTATTTGAAAATGTGTTTCCTGTTATGTCTTGCGACATTTCAGTTGTGAATGTTAATAATACTGAATGTCTGGATATTGTGCGAGGAATGAATCCCTCGAATTGTAATCCTAACAACCAAAACAAGGTCAATAATCAGTCCACTGGAGCATTGGAATTGCTTCCTACTGCAAGCTCCCTTACTGTAGGTGATCAAAGGTTCCCTGATCAGGTTTCAGGGTCAAATCATGTCGGTTATAGAGAGAGTATAAATATTGTTCCGAATAATGATCACAGTGCTGCTGTTTGTCCTCATGAATCATCTGACGCATTGAGGTTTTCTTCTTTAACTTCCCTTACGGGAAATGTTAGAAGGTTCCCAGATGGGCTTTCTGGATCAAGTGATCTCCATTGTCAAGCAAGTGAGAGTTCTAGCACAGCTGCACAAACTGGAATTTCCAAACGGCGGGCTTCTGAAGTCTATGGCAGCAATGGTCTAAACATATCTACTCCATGTACTAGTCCTGTTAATCATCAAGAACAGTTTGAGACTATTATTGGTCATGGTACTATAAGGCCAGTTTCTGATATGCAGCATCTGAATGCAGCAAGACTATCTGAAAACTACCGTAGGAACATTCATCATCATACAGCTGCAAATCAACAAGCTTTTCTACCAACCAGCATTTTGTCATCAAGTAGCACGAGGAATGCTCATATCCAGCTACCCAGTAGTAGTGTTTTTTCTTCATTTTTGCCTGTCTATACTGCAGTGGAAAGTGAGGCTGTGGCACCCCTTCATTACCCAAGAAACATAATTGAGAGCACCACGATCGGCCACCAAATTGGAAGAAGACATTGGGTACATGATGCAAGAAACTCGCATTCTGTTAATGGAACTGCAAACTTCCATGGAGATTTCTGTCCCCTTCATGGTTTTGCTTGTGATATAATTCATCCAGCAAATACCCCTACTTGCTTCCCAGGGTTCAATTTTGCTGATCGTTATGCGCCGACACCATCAAGGATTGTAAACCATCCTGTGCTTGCAACTACTGGTTTCCCTAGGCATAGTCACAGCCCAGCAGATTCAGGCCCTTCAGCAGTCTTACAGGAAATGGGCTTTGCTGTTGGATTTGGTAATGCCGTATCTCAGAATCAGCATACATCAGGAGCAAGATCTGAGAACCATGCTGCTTCTAATTTTACATGGTCACTTGCTAATGCTCGAAATAGAATGTCGCTGAGGCCTGAGAATCTGCGCCCATCAGAAGCAAGATTCGAGAATGAAGATGGTAGCTATTATCATTATTTTTGGTCACCTGCTAATGCTGAATATAGAAGGAGGATGAGTCTGGAGCTTCACCATCTCCTTGGCCAACTGCACAGGGCCAGTGGTGACCCCTCGCGGCCTGTGACGATTCCTCGGGAATTGAGGATGTTGGACCAGTCGGTTGTAATGGATATGCTTGGGGAGCATGACAGTGGAGATGAGCTTCAGAATGTTGCTGACCTAGCAGAGCCTGGTAGCGTACCAGAGATGGGGCTGAGTGAGGAAGTGATTCTCGGGCACCTTTGGCAGGAAAATTTCCAGCCCAACGCAGATGAGTCTGAGGGAAATGAATGCTGCTGCATATGTCAGGAGGATTACCAAGAGAATGAAGTTCTGGTTTATAAAGACAAAGCAGCCGCTCCGAACTACACTAACCCAATGAAGAGATTTCTGCAACCAACTCCGAAGAAAAAAAGAAAACGAACCTCACTCTTGCTTCACTCTCTCGTCAAGCAAAAGCCATATCCAAAAGCTAAGAAGCAGAGAGACATGGGGGATTTGTACGGCTTTGGAAAGGGTAACATTATTCCTTCTCCGTCTTCTTCTTCAACCTCACCTCCTGACGATTTTTCCCTTTTTCTGCATCAGATTCTCCTCCCTCCTCCCTCCTTCTCCTCCGCCGGACCGCCACCGTCTTCCCTCCTCCTCACCCACATGCCTGAGAACGCACCTAATGACACTTCTGAGCATGAAAATGCAAACCTTTCGTACCCATCTTCTCTGCTTCAAGACGTAATCTCAGGCGTTGATTCTACCTCTAAAAACCATGCCCTTCTCTCGGCTTATATCAAGGGAGGTTCTGCTGCAAATGTGTCTTCCTCCTCCGTCGGAGTAAGTGGGAATGACACTGATGAGTATGATTGTGAAAGTGAGGGGTGTACGGTTGAAGCAATGGTTGCCAAATCAGTTCCTCCAAGGCGTTCATCGAAGAGAAGCAGAGCTGCTGAAGTTCATAACTTGTCTGAGAAGCGAAGGAGGAGTCGGATCAACGAAAAGCTGAAGGCTTTGCAGAATCTAATTCCAAATTCAAATAAGATGCTTTCTGTGAGAAATGGATCGAATATGCTTCCTGTGTGCTTCCCCGAAGGCTTGCAGACTCTGCACTTGTCTCAGATGAGCGAAGAAGACGGGTCGTGTCCTTTAAACCTAACTGCTACTATGCCTCTTGACAAACGCACTGTGCCCTCTTTATCAAATATAATCAACGAAACACCTTTTGGGCTGAATTCCCAAATCATAGGGCATCTTAGACCCTTTGAAACATCATCTTCTGAGGGAGGACATGTTGCAGCACCAGCAATTAAATGCAGAAGATTCAAATACCAACTTTGGGTGATTCTCAAGCTGTACGCGAATGCGAGTCAGGCACGTTGGCTACAGTATCACTCATTTGATAAGCAAAGCAACCGAAGTGAAGGAGAATTGAAAGCATGCATTGCAAGAGCTTGA 2811 0.4486 MYVMDYWGFWHLSASVTVFENVFPVMSCDISVVNVNNTECLDIVRGMNPSNCNPNNQNKVNNQSTGALELLPTASSLTVGDQRFPDQVSGSNHVGYRESINIVPNNDHSAAVCPHESSDALRFSSLTSLTGNVRRFPDGLSGSSDLHCQASESSSTAAQTGISKRRASEVYGSNGLNISTPCTSPVNHQEQFETIIGHGTIRPVSDMQHLNAARLSENYRRNIHHHTAANQQAFLPTSILSSSSTRNAHIQLPSSSVFSSFLPVYTAVESEAVAPLHYPRNIIESTTIGHQIGRRHWVHDARNSHSVNGTANFHGDFCPLHGFACDIIHPANTPTCFPGFNFADRYAPTPSRIVNHPVLATTGFPRHSHSPADSGPSAVLQEMGFAVGFGNAVSQNQHTSGARSENHAASNFTWSLANARNRMSLRPENLRPSEARFENEDGSYYHYFWSPANAEYRRRMSLELHHLLGQLHRASGDPSRPVTIPRELRMLDQSVVMDMLGEHDSGDELQNVADLAEPGSVPEMGLSEEVILGHLWQENFQPNADESEGNECCCICQEDYQENEVLVYKDKAAAPNYTNPMKRFLQPTPKKKRKRTSLLLHSLVKQKPYPKAKKQRDMGDLYGFGKGNIIPSPSSSSTSPPDDFSLFLHQILLPPPSFSSAGPPPSSLLLTHMPENAPNDTSEHENANLSYPSSLLQDVISGVDSTSKNHALLSAYIKGGSAANVSSSSVGVSGNDTDEYDCESEGCTVEAMVAKSVPPRRSSKRSRAAEVHNLSEKRRRSRINEKLKALQNLIPNSNKMLSVRNGSNMLPVCFPEGLQTLHLSQMSEEDGSCPLNLTATMPLDKRTVPSLSNIINETPFGLNSQIIGHLRPFETSSSEGGHVAAPAIKCRRFKYQLWVILKLYANASQARWLQYHSFDKQSNRSEGELKACIARA 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0135 936 MobiDBLite consensus disorder prediction 144 166 - -
Lele54g0135 936 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 764 799 IPR036638 GO:0046983
Lele54g0135 936 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 636 799 IPR031066 -
Lele54g0135 936 MobiDBLite consensus disorder prediction 672 687 - -
Lele54g0135 936 MobiDBLite consensus disorder prediction 763 779 - -
Lele54g0135 936 Gene3D - 759 814 IPR036638 GO:0046983
Lele54g0135 936 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 767 821 IPR011598 GO:0046983
Lele54g0135 936 MobiDBLite consensus disorder prediction 757 779 - -
Lele54g0135 936 MobiDBLite consensus disorder prediction 142 166 - -
Lele54g0135 936 Pfam Helix-loop-helix DNA-binding domain 771 798 IPR011598 GO:0046983
Lele54g0135 936 MobiDBLite consensus disorder prediction 658 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0135 Lele-ChrLele54 1134340 1143984 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0135 735 873 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 40.237 1.28e-19 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele54g0135 HLH 1.2e-06 No_clan