Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0129 ATGGACGTGGATGACAGAAGCATGGACATGATGGCAATGATGATGCAGATGGAGAAGTTTCCTGAATTCTCTGAACCTTTTTACCCATCAGAACCCCCATTCTCCACCCCCACCTCCACCCCCACCAGTATACCCATACTCTCCAATAACACGAACAATCATCCTCCACCACCTAATCATAATCCCTTTGTGGCAAACCCTATTAATCCAACCCCACAACTAGTGACACCACACCTGATTCAACCCAACAAATTCAGGAATAATATTACTGATAATCCCAATGCTTGTTCTTCTTCTTCATCTTCTGAGAAGAAGAATTCTATGGCGGCCATGAGGGAAATGATATTTCGTATAGCAGTGATGCAACCCATTCACATAGACCCGGAATCCATCAAGCCTCCGAAGAGAAGGAACGTGAAGATATCGAAGGATCCGCAAAGCGTGGCGGCGAGGCACCGGAGGGAGAGAATAAGCGAGAGGATTAGGATTCTGCAGAGATTAGTTCCTGGAGGGACAAAAATGGACACGGCGTCAATGTTGGACGAAGCTATACATTACGTTAAGTTCTTGAAGAAGCAAGTTCAGACGTTGGAACAAGCAGGAGCGAGTACAGCTGTGGGTTATGGGGTACCTGCTAGCTTCAATATGAATAATAATTATTCTACTTTCATGAAGGATTATCACAAACCTTCTCAGATGATGGTGGGTAGTTCTATGCAAATGTTAAGCTGA 732 0.4467 MDVDDRSMDMMAMMMQMEKFPEFSEPFYPSEPPFSTPTSTPTSIPILSNNTNNHPPPPNHNPFVANPINPTPQLVTPHLIQPNKFRNNITDNPNACSSSSSSEKKNSMAAMREMIFRIAVMQPIHIDPESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQAGASTAVGYGVPASFNMNNNYSTFMKDYHKPSQMMVGSSMQMLS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0129 243 SMART finulus 147 196 IPR011598 GO:0046983
Lele54g0129 243 FunFam BHLH transcription factor 144 206 - -
Lele54g0129 243 Coils Coil 180 200 - -
Lele54g0129 243 Pfam Helix-loop-helix DNA-binding domain 151 190 IPR011598 GO:0046983
Lele54g0129 243 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 15 240 IPR045843 GO:0003700|GO:0006355
Lele54g0129 243 Gene3D - 140 205 IPR036638 GO:0046983
Lele54g0129 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 201 IPR036638 GO:0046983
Lele54g0129 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 190 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0129 Lele-ChrLele54 1093364 1094095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0129 1 212 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 56.306 9.07e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele54g0129 HLH 1.4e-06 No_clan