Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0112 ATGGGTCTCTGTACTTCAAAGCCCTCAGCAAATCTTACACCTGCGTCTCCCAAATGCGAAACTGAATCGCCCAGGAATAACCAGGTACCACCTAGAGAAGACTCTCTGCCTGTTAATGACTGTCCTCAACCTCATTCGAGCACTGTGAACGGAGAAAACCCAAGCAAGGAGAAGAAAGAGGCGGAGAATGGTAAAAAATCGCCTTTCTTCCCGTTTTACAGCCCAAGTTCGGCCCACTATTTGTTCTCCAAGAAGTCTCCGGCGAGATCTCCGGCGAATGGGAGCTCGAACTCCACGCCTAGGAGGTTCTTCAAACGCCCGTTCCCACCTCCGTCGCCGGCGAAGCACATAAAAGCTGTGTTGGCCAGGCGGCATGGGTCGGTGAAGCCGAATGAGGCGACAATACCAGAAGGGAGCGAAGCAGAGGTGGTTGCTGGGCTTGATAAGAGTTTTGGATTCTCAAAGCATTTTGGGAACAAGTATGATTTAGGAGATGAGGTTGGTAGAGGTCACTTTGGGTACACTTGTGCTGCCAAGTTTAAGAAGGGCGAGCTCAAGGGGCAACAGGTGGCTGTGAAAGTTATCCCGAAAGCAAAGATGACCACTGCCATTGCTATTGAGGATGTCAGAAGAGAAGTAAAAATATTGAGAGCTTTAACAGGACATAAGAATCTTGTACAATTCTATGATGCATACGAAGACCAGGATAATGTCTATATAGTAATGGAGTTATGTGAAGGAGGGGAGCTGTTGGACAGAATACTATCAAGAGGTGGGAAATACTCAGAGGATGACGCAAAAGCTGTAATGATACAAATACTTAATGTTGTTGCATTCTGCCATTTACAGGGTGTTGTGCATCGCGATCTCAAACCTGAGAATTTCTTGTTTACATCGAAAGATGAAAACTCAGAGCTGAAGGCTATAGACTTTGGGTTGTCCGATTTTGTAAAACCAGATGAGAGGCTTAATGATATTGTTGGCAGTGCATACTATGTGGCTCCTGAAGTTCTACATAGATCATACACCACAGAGGCTGACGTCTGGAGTATTGGTGTGATTGCATATATTCTTTTATGTGGAAGCCGTCCATTTTGGGCCCGGACTGAGTCTGGAATCTTTCGTTCTGTATTGAAAATCGATCCAACTTTTGATGAACCTCCTTGGCCGTCTCTATCAGCTGAGGCAAAGGACTTTGTTAAACGGCTACTGATTAAAGATCCACGGAAAAGAATGACGGCTGCACAGGCATTAAGTCATCCCTGGATTAAAAATTACAAGGATGTAAAAGTTTCTTTGGATATTATAATATTCAAGCTCATGAAGGCATACATGCGTTCCTCATCTCTACGGAAAGCAGCTTTAAGGGCACTGTCTAAGACGTTAACCGCAGATGAGCTATTTTATTTGAAGGAGCAGTTTACACTTTTAGAGCCTAACAAAAATGGTACTATAACCTTGGAAAATATCAAAGCGGCCTTGATGAAAAATGCTACAGATGCCATGAAAGAGTCACGCATTCTAGACTTTCTGGCATCACTTAATGCATTGCAATATAGAAGGATGGATTTTGATGAGTTCTGTGCAGCTGCACTCAGTGTTCATCAACTCGAAGCACTTGGTCGGTGGGAGCAGCACGCTCGCTGTGCCTTTGAACTTTTTGAAAAAGATGGAAACCGCGCCATTGTCATTGAGGAACTAGCTTCGGAACTTGGCCTTGGCCCCGCTGTCCCTGTTCATGCTGTGCTTCATGATTGGATTAGACACACTGATGGAAAGTTAAGCTTCCTTGGCTTTGTCAAATTGTTGCATGGACCATCTCGAAGTCTTGCTAAGGCTCAATAG 1845 0.4477 MGLCTSKPSANLTPASPKCETESPRNNQVPPREDSLPVNDCPQPHSSTVNGENPSKEKKEAENGKKSPFFPFYSPSSAHYLFSKKSPARSPANGSSNSTPRRFFKRPFPPPSPAKHIKAVLARRHGSVKPNEATIPEGSEAEVVAGLDKSFGFSKHFGNKYDLGDEVGRGHFGYTCAAKFKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDQDNVYIVMELCEGGELLDRILSRGGKYSEDDAKAVMIQILNVVAFCHLQGVVHRDLKPENFLFTSKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRSYTTEADVWSIGVIAYILLCGSRPFWARTESGIFRSVLKIDPTFDEPPWPSLSAEAKDFVKRLLIKDPRKRMTAAQALSHPWIKNYKDVKVSLDIIIFKLMKAYMRSSSLRKAALRALSKTLTADELFYLKEQFTLLEPNKNGTITLENIKAALMKNATDAMKESRILDFLASLNALQYRRMDFDEFCAAALSVHQLEALGRWEQHARCAFELFEKDGNRAIVIEELASELGLGPAVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0112 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Lele54g0112 614 ProSitePatterns Protein kinases ATP-binding region signature. 167 193 IPR017441 GO:0005524
Lele54g0112 614 FunFam Calcium-dependent protein kinase SK5 333 428 - -
Lele54g0112 614 FunFam CDPK-related kinase 1 154 249 - -
Lele54g0112 614 MobiDBLite consensus disorder prediction 1 33 - -
Lele54g0112 614 Gene3D - 463 532 - -
Lele54g0112 614 Pfam Protein kinase domain 162 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0112 614 FunFam CDPK-related kinase 3 153 325 - -
Lele54g0112 614 SUPERFAMILY Protein kinase-like (PK-like) 158 450 IPR011009 -
Lele54g0112 614 MobiDBLite consensus disorder prediction 84 102 - -
Lele54g0112 614 MobiDBLite consensus disorder prediction 84 112 - -
Lele54g0112 614 Gene3D Transferase(Phosphotransferase) domain 1 250 439 - -
Lele54g0112 614 SMART serkin_6 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0112 614 Gene3D Phosphorylase Kinase; domain 1 154 249 - -
Lele54g0112 614 PANTHER SERINE/THREONINE-PROTEIN KINASE 145 589 - -
Lele54g0112 614 ProSiteProfiles EF-hand calcium-binding domain profile. 465 500 IPR002048 GO:0005509
Lele54g0112 614 SUPERFAMILY EF-hand 451 605 IPR011992 -
Lele54g0112 614 ProSiteProfiles Protein kinase domain profile. 161 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0112 614 Gene3D - 441 602 - -
Lele54g0112 614 FunFam CDPK-related kinase 1 459 532 - -
Lele54g0112 614 MobiDBLite consensus disorder prediction 1 70 - -
Lele54g0112 614 CDD STKc_CAMK 160 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0112 Lele-ChrLele54 903377 908085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0112 1 614 EF-hand Containing Proteins AT3G50530 75.542 0.0 986
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele54g0112 Pkinase 2.1e-71 CL0016