Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0111 ATGGCGGATCCCAGTCCCTCTTCTAGGTCTTTCCTCTTCTCTCTCCTCAATCTTATGAATATGAAATTATCACCTTACACCTATTTGCATTATTCATTTCTTTGCTTTTCTTTCCCCTTCGGTTCTCTTGAACATTTTCATTTGTATCTTTTCTGTGCGGGCTATAGCTCTGACCATCCGGAATATGCTGAGGTCGTTGTGATACGTCATGGTGAAACAGCGTGGAACGCTGATGGAAGACTGCAGGGACAACTTGATGTTGAGTTAAATGAAGTTGGAAGAGCGCAAGCAGCTGCAGTTGTGAAGGACCCTGACCTAAGGGAAAGACACCTTGGGGATCTTCAAGGCATGTCCCGTGTTGAAGCAGCGAAGGCTAATCCCACAGCTTGCAAGGCTAAAGATCTTGGTCAAGAAATACCAGGTGGTGGAGAAAGTCATGATCAACTTTCCAAACGCTGCACATCTGCATTGCAGAGAATTGTCATGAAGCATTTAGGGAAGCGGGTGGCAGTTGTTACTCATGGAGGTGTCATCAGATCACTTTACATGCGGGTCAACACAGACAAACCTACTGGGAGCATACTCAACACTTCTATCAATGTCTTTCACTTGTATGCAGACAAGTGGGTTATAAAAACTTGGGGCGATGTTAGCCATCTGAACCAAACAGGATTTCTGCAGCCTGGTTTTGGAGGTGACAGTACTTCTGGTTAG 714 0.4524 MADPSPSSRSFLFSLLNLMNMKLSPYTYLHYSFLCFSFPFGSLEHFHLYLFCAGYSSDHPEYAEVVVIRHGETAWNADGRLQGQLDVELNEVGRAQAAAVVKDPDLRERHLGDLQGMSRVEAAKANPTACKAKDLGQEIPGGGESHDQLSKRCTSALQRIVMKHLGKRVAVVTHGGVIRSLYMRVNTDKPTGSILNTSINVFHLYADKWVIKTWGDVSHLNQTGFLQPGFGGDSTSG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0111 237 Pfam Histidine phosphatase superfamily (branch 1) 100 216 IPR013078 -
Lele54g0111 237 Gene3D - 101 224 IPR029033 -
Lele54g0111 237 Gene3D - 55 100 IPR029033 -
Lele54g0111 237 SMART PGAM_5 64 181 IPR013078 -
Lele54g0111 237 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 67 76 IPR001345 GO:0003824
Lele54g0111 237 SUPERFAMILY Phosphoglycerate mutase-like 64 221 IPR029033 -
Lele54g0111 237 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 102 206 - -
Lele54g0111 237 CDD HP_PGM_like 64 216 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0111 Lele-ChrLele54 890857 893032 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0111 54 890857 893032 Lele56g1321 56 16488632 16492745 hybridization