Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0109 ATGGCGAAGTGGTGGCGCTCCGCCGCCGGTAACCTCCGAGCGGTGGCTACTAGCCGTTGGGAGTACTCGTTCTTATTGAGATTCCAGTACGCTTCCTACCACACGATCCAAGCTATCCCAAGGGAGTGCACTGGTAGTCGAGTCTCTGCTAGAGACAGATTGCAAGGCCGAATTCCGGCCGTTGTTGAGTACCAGAATCTTCTCAGTAAAAATGATGTCGTCCAATCGGCGTCGAGGAAACGTTTGCTTACCACAGAGAGGAAGCAGATTAAGGCCATCCTCAATTCCGTGGACCTTCCTTTCCTTCCTTTCTTCTACTCGACCCGGTTTCCTCTCCAGATCCGTGCTGGCTCTGGATCTTCCCATATGCTCGAGTCTGGAACTGTGCTACCGATTAAGATTCATAGGGACGAAGAGAGTGGGAAAATTCTAAATTTAGTGTTTGTTTGGGCTGATGATGGGCTGGACTTGAAGGTGGATGTGCCTGTAGTTTTTAAAGGCGAAGATGTTTGCTCTGGCTTGCAGAAAGGTGGCTGTTTGAACAGGATCCGAACTAGTCTGAAATTTCTTTGTCCATCTGAGCACATCCCAGCAAAAATTGAGGTGGATGTGAGCAATCTAGATATTGGAGACAGGGTGTTCATGCGTGATATTGAGGTTCATCCATCCTTAAAGCTTCTGAGTAAGAATGAAAACATGCCTGTGGCTGTTGATGTCAAATGGATTATTGATTTCTATGTCCCCTCTTTGAACGGTACTGTCATTACTGTTCTTACGGGACCATTTCAAATCATCCCAAGAATGTCTTGTTTTCTGTGTGGTTACTCCTGTTGCGTTGAACCAAAATGTGGCAAGCTTACAGCTGGAAAAAACTACACATGGGTGAGTTCGACAAAAGGGAACACTGTTCACCCCGTCTGCCACTCTTCGAGCAAGGCATCCAGACAAAGAGAGAAGCTAGCCATGGATCCCCCTCCAACCCAATCTATTGAAGTTTCAAACTTCCAGGCAGGGAATGATGATCCTCAGGACAAGGCCATCAATGAGTGCTGTTCTTGCTGCTATGATTGCACAGGAGGCTGCTTCGATTACTTGTTCTGTCCATTCTGGCCTGTACCTCTTGGTCGCAGAGATGGCACGACAGCAAACGAGACTGAGGCTAATAATTTGCCGTCACCTTTTGAGCCCCTTCAAAACATCATTGGCAAGTTCACCAATAAGGGACTTGCTGTTAATGATGTAGCTACCCTCTCAGTTTCCATGGAGAAGATGGGACGCATTGGTGTTCTCACTTGA 1296 0.4738 MAKWWRSAAGNLRAVATSRWEYSFLLRFQYASYHTIQAIPRECTGSRVSARDRLQGRIPAVVEYQNLLSKNDVVQSASRKRLLTTERKQIKAILNSVDLPFLPFFYSTRFPLQIRAGSGSSHMLESGTVLPIKIHRDEESGKILNLVFVWADDGLDLKVDVPVVFKGEDVCSGLQKGGCLNRIRTSLKFLCPSEHIPAKIEVDVSNLDIGDRVFMRDIEVHPSLKLLSKNENMPVAVDVKWIIDFYVPSLNGTVITVLTGPFQIIPRMSCFLCGYSCCVEPKCGKLTAGKNYTWVSSTKGNTVHPVCHSSSKASRQREKLAMDPPPTQSIEVSNFQAGNDDPQDKAINECCSCCYDCTGGCFDYLFCPFWPVPLGRRDGTTANETEANNLPSPFEPLQNIIGKFTNKGLAVNDVATLSVSMEKMGRIGVLT 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0109 431 Gene3D Peroxidase, domain 2 391 418 - -
Lele54g0109 431 Gene3D Ribosomal protein L25, beta domain 156 233 IPR037121 -
Lele54g0109 431 Pfam Peroxidase 368 418 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele54g0109 431 FunFam Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain-containing protein 154 240 - -
Lele54g0109 431 SUPERFAMILY Heme-dependent peroxidases 367 420 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele54g0109 431 Pfam Ribosomal protein TL5, C-terminal domain 157 236 IPR020057 -
Lele54g0109 431 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 25 236 - -
Lele54g0109 431 Gene3D - 368 390 - -
Lele54g0109 431 ProSiteProfiles Plant heme peroxidase family profile. 368 431 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele54g0109 431 SUPERFAMILY Ribosomal protein L25-like 33 236 IPR011035 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0109 Lele-ChrLele54 872957 880680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0109 368 418 Peroxidase AT1G49570 65.385 8.39e-14 70.5