Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0102 ATGATGAAGGCCCCCATGGCTATGAAGTATTATTACAACACTTTGGCGTTGCTATTATTTTGTTTTATGTATGTTTGTGTAGTGGCTGCTAAACATGAAGGGTTAGGAGCGTCTTTTATATTTGGAGATTCATTGGTAGATGCAGGAAACAATAATTATCTTTCAACTCTTTCAAAGGCAAATATTCCTCCTAATGGTATCGATTTTAAGGCCTCTGGTGGAAGTCCCACTGGTCGATTCACTAATGGAAGAACCATTGGTGACATTGTTGGAGAGGAGCTTGGACAACCAAATTATGCAGTCCCATTTTTGGCTCCAAACGCAACCGGCAAAGCTTTGCTGTATGGAGTAAACTACGCTTCAGGAGGAGGAGGGATTCTTAACGCAACTGGAAGAATCTTTGTGAATAGGGTTGGAATGGATGTTCAGATAGATTACTTCAGCGTAACAAGAAAAGAGATTGATAAATTGCTAGGCAAGGAAAAAGCGAGGGAATACCTTATGAAGAAATCCATTTTCTCAGTCACAGTTGGAGCAAATGATTTCCTCAACAACTATCTTCTCCCAGTTCTCTCCGTCGGAGCCAGAATCTCTCAGAGCCCAGACGCCTTTATCGACGATATGATCACTCACTTGAGATCCCAGCTTACCAGACTCTACCAGCAGGATGCTCGAAAATTTGTGATCGGAAACGTTGGTCCTATAGGATGCATTCCCTACCAGAAAACGATAAACCAGTTGAACGAAGATGAGTGTGTGGATCTGGCTAACAAGCTCGCTCGTCAATATAATGAAAGACTCAAGGATTTGCTTGCTGAGCTTACTGACAACCTTCCCGGAGCAACGTTCGTGCATGCAAATGTCTACGACTTAGTCTTAGAACTCATCAGAAACTACAAAAACTATGGGTTTGTGACAGCAAGCAAAGCATGCTGTGGAAATGGGGGTCAATTTGCAGGGATAATACCGTGTGGACCAACATCAAGCATGTGTTCAGATAGGTACAAGCATGTGTTCTGGGATCCTTATCATCCGAGTGAAGCAGCAAACCTAATACTCGCCAAACAGCTTCTGGATGGAGACAAGAGATCCATATCTCCTATGAATCTTAGGCAACTTCTAGACCTTTGA 1131 0.4279 MMKAPMAMKYYYNTLALLLFCFMYVCVVAAKHEGLGASFIFGDSLVDAGNNNYLSTLSKANIPPNGIDFKASGGSPTGRFTNGRTIGDIVGEELGQPNYAVPFLAPNATGKALLYGVNYASGGGGILNATGRIFVNRVGMDVQIDYFSVTRKEIDKLLGKEKAREYLMKKSIFSVTVGANDFLNNYLLPVLSVGARISQSPDAFIDDMITHLRSQLTRLYQQDARKFVIGNVGPIGCIPYQKTINQLNEDECVDLANKLARQYNERLKDLLAELTDNLPGATFVHANVYDLVLELIRNYKNYGFVTASKACCGNGGQFAGIIPCGPTSSMCSDRYKHVFWDPYHPSEAANLILAKQLLDGDKRSISPMNLRQLLDL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0102 376 Coils Coil 253 277 - -
Lele54g0102 376 CDD SGNH_plant_lipase_like 37 361 IPR035669 -
Lele54g0102 376 Gene3D SGNH hydrolase 27 361 IPR036514 -
Lele54g0102 376 Pfam GDSL-like Lipase/Acylhydrolase 39 356 IPR001087 GO:0016788
Lele54g0102 376 SUPERFAMILY SGNH hydrolase 41 359 - -
Lele54g0102 376 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 19 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0102 Lele-ChrLele54 813284 814924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0102 37 374 Acyl Lipid Metabolism Gene Families AT4G10950 34.218 1.26e-65 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele49g0230 49 1360214 1365108 Lele54g0102 54 813284 814924 CCT
Lele54g0102 54 813284 814924 Lele55g1394 55 20302862 20304691 hybridization
Lele54g0102 54 813284 814924 Lele56g1330 56 16560531 16562184 hybridization