LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele54g0101	ATGCAGGATTCCTTCCCATTCTCACCAACCTTCATCATCAGCTTGCTTGCCCTTCTGGTCTGCATCTTTATTTACTACTTCAGAAGATGGCTTACAAATAAGGTCTCTAATGCCCCTCAAGCAGGCGGGGCATTGCCTATTATTGGCCATCTTCATCTTTTTGGTAGGCATCAACTTTTACATGAAACCCTAGCTGCCATGGCTGACAAGTATGGACCAGCTTTTACCATAAAGATGGGTTCGCACAAAGTCCTCATAGTGAGCAGTTGGGAAATGGCCAGAGAGTGTTTCACTGTACATGATAGAGTATTTTCCACCAGACCCATTGTTACTGCTTCAAAGTTACTAGGCTATGATTGTGCAGTGTTTGGATTTGCACCTTATGGCCCTTACTGGCGTGAGGTGAGAAAGATAGCAACAGTTGAGCTTCTTTCAAATCATAGGCTTGAGAAATTAAAGCATCTGAGAACTACTGAGGTGGAGATTGCAGTTAAAGAGCTGAACAATTTATGGTCAAGCCAAGGATGCCCTGAAAATGGGGTTTTAGTGGAGATGAAGCAATGGTTTGGAAATTTATGTTTTAATGTTCTTCTGAGAATGGTGGCAGGTAAGAGATACTTTGGAGCAAGCTCTGAGGATGATGGTGAGGCTCAGTACTGCCAGAAAGTGATTAGGGATTTGATACATTTATTTGGGGTTCCTGTGATTTCTGATGCAATCCCATTGCTTAAGTGGTGGGATATGAATGGTGTTAAGAAGGAAATGAAGAAGACTGCTAAGAAATTGGACCAATTCATTGGTGAGTGGTTGGAGGAACACAAAAAGAGAAGACTATTATTAGGCGAGCAGGCACGGGAAGAACAAGACTTCATGGATGTGATGCTGAGGATCCTGCATGAAAACCCAATTCCCTTTTTTGACTCTGATACTATTATCAAGGCAACTAGCATGAATATGATAGCAGGAGCAGACTCCATAGTGGTGGCAATAACATGGGCTTTGTGTCTGATACTGAACAATCCAAGAGTGATGAAGAAGGCTCAAGATGAGCTAGACAACCAAATAGGGATAGAAAGACAAGTGAAAGAATCTGACATTAGGAATTTACCAAGCCATTGCACACAGTTGATGGTGAACATATGGAAAATGCACCGCAACGAGCGCGTGTGGCCAGATCCTCATAGCTTCAAACCAGAAAGATTCTTAGCTAGTCATAAGGATATTGATGTGAAGGGCAAAAACTATGAGCTTCTTCCATTTGGCTCAGGAAGGAGATCATGCCCTGGTATGGCATTAGCACTACACATGATGCATCTTACCTTGGCTACACTGTTGCAGAGTTTTGAAATGTTTACCACTTCTAATGAACCTTTGGACATGACTATGAGCACTGGTTTGACAAGTATAAAGGCAAACCCACTTGAGGTCTTTCTTATTCCTCGCCTTAAATTCTAA	1455	0.4227	MQDSFPFSPTFIISLLALLVCIFIYYFRRWLTNKVSNAPQAGGALPIIGHLHLFGRHQLLHETLAAMADKYGPAFTIKMGSHKVLIVSSWEMARECFTVHDRVFSTRPIVTASKLLGYDCAVFGFAPYGPYWREVRKIATVELLSNHRLEKLKHLRTTEVEIAVKELNNLWSSQGCPENGVLVEMKQWFGNLCFNVLLRMVAGKRYFGASSEDDGEAQYCQKVIRDLIHLFGVPVISDAIPLLKWWDMNGVKKEMKKTAKKLDQFIGEWLEEHKKRRLLLGEQAREEQDFMDVMLRILHENPIPFFDSDTIIKATSMNMIAGADSIVVAITWALCLILNNPRVMKKAQDELDNQIGIERQVKESDIRNLPSHCTQLMVNIWKMHRNERVWPDPHSFKPERFLASHKDIDVKGKNYELLPFGSGRRSCPGMALALHMMHLTLATLLQSFEMFTTSNEPLDMTMSTGLTSIKANPLEVFLIPRLKF	484

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele54g0101	484	PANTHER	CYTOCHROME P450 82C3-RELATED	15	370	-	-
	Lele54g0101	484	Gene3D	Cytochrome P450	32	371	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lele54g0101	484	Gene3D	Cytochrome P450	372	483	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lele54g0101	484	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	420	429	IPR017972	GO:0005506\|GO:0016705
	Lele54g0101	484	PRINTS	E-class P450 group I signature	92	113	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lele54g0101	484	PRINTS	E-class P450 group I signature	330	356	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lele54g0101	484	PRINTS	E-class P450 group I signature	68	87	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lele54g0101	484	PRINTS	E-class P450 group I signature	192	210	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lele54g0101	484	PRINTS	E-class P450 group I signature	379	403	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Lele54g0101	484	PRINTS	E-class P450 group I signature	427	450	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele54g0101	Lele-ChrLele54	808334	810655	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele54g0101	15	483	Cytochrome P450	AT4G31970	44.141	8.61e-156	451

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