Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0087 ATGGCTGAAATTAGGCTTACTAGGGTAGAGCAAGGTCAAACCAAGATAAAAAATGTTCCAATCGCTGTCACCCCGGAAGGTTTTTGGTGCTGCCCTTCTCCAGTTGTGTTTCACAAAAGTTTCAAATCTCAAAACCCTCTCAATAAAACCAAACCCTCCTCCTCACCACCACCACCACCTCAAAAAATTAGTATCCAGAAAAAGCCAATCCAATTTAGCGAGAGAAGACCAGCATCTGTCCCACCAAGATCAACGGTTTCTGATGATCAACAGTATGTAGCTCCTGAAAGACAAGTTGGTACGTCTATGGTCACAGAGAGACCAGAGAGACCCAAAATTGAGAATTTACCTAGAAAGGTAGCTATTGAGTTTGGTGAGGCTGGAACTTGTGATATGAAGGTGGTCTTACTTGGAATGCAGGGTTTTTGTGTGAAGTTAAGCGTGCACAGGGATGTTCTCAAAGAGAAGAGTAGTTTCTTTGCTGATAAACTCTCTGTACAATCTGACTTGTCATGTCTCCAAATTGATGATTGTGAGGATGTTGAAATATATGTTGAGACTGTTGGACTGATGTACTGCAAGGAAATGAAGCAGCGGTTGATGAAACAAAGTGTTTCTCGCATACTTCGGATACTCAGGGTAGCAGAACTTCTTGGCTTCACCAGCTGTATCCAGTCATGTTTGGAGTACTTGGAGGCAGCCCCGTGGGTTGGAGATGAAGAAGAAGAAAAAGTGGTCTCAACAGTTCTACGACTCCAAGGGGAAGGAGTTGGGGTCAACCCTGTGTTGAAACGAGTTTTCTCTGATATCACCAAGGCCCCAAATGATACTCTGTCCCACATCATCGAGCTCGTTCTCACGAGTAAGGAGGAAAAAGGACGCCGAAAGATGAAAAACATAGTTCTGAAGCTCCTCAAAGAGAACAACAATGTTCCAAGCCATTCTGGCTCTTCAGACATCTGTAAAGAAATGATTTACCGATCATGCAGAAGCTGCTTGGATTCTCTATTGGCTCTGTTTAGGCAGGCTGCAGAACTAGAGCTGGCTGATAAATCTTCCAGTAACAAAGAACCTTTGCTAAAACACATAGCTCTTGAAGCTGATAACTTGTCATGGTTATTAGAGATACTAGTCAACAAACAAGCTGCAGATGAATTTGCAGTGATATGGGCGAACCAGCAGGAATTGGCTGTCCTTCATGAGAAGCTACCTATCGTATCCCGTTATCATGTCAGTTGCATCTCAGCAAGACTATACGTTGGCATAGGAAGAGGGGAGTTGTTGCCATCGAAGGACACGCGTCAGTTGGTGTTACAGACATGGTTACAACCTTTAATCAATGACTTCTGCTGGTTACAACATGGGTGCAGGTCGTTTGATAGTAAGGTAGTGGAAGAAGGAATTGGGAGGACTATTCTCACTCTACCTCTGGAGGATCAGCAAAGTATTATGCTTTCTTGGGTGGGAAGTTTTTTGAAGGTCGGCAACAAGTGTCCGAACCTTCAGAAAGCTTTTGAGGTGTGGTGGCGGAGGACTTTCACAAAACCTTATGAGGAAGGACAAGGTAAGAATAATGTGGGATCTGATAGTTTTTTCAACGTTGTCTAA 1608 0.4366 MAEIRLTRVEQGQTKIKNVPIAVTPEGFWCCPSPVVFHKSFKSQNPLNKTKPSSSPPPPPQKISIQKKPIQFSERRPASVPPRSTVSDDQQYVAPERQVGTSMVTERPERPKIENLPRKVAIEFGEAGTCDMKVVLLGMQGFCVKLSVHRDVLKEKSSFFADKLSVQSDLSCLQIDDCEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILRVAELLGFTSCIQSCLEYLEAAPWVGDEEEEKVVSTVLRLQGEGVGVNPVLKRVFSDITKAPNDTLSHIIELVLTSKEEKGRRKMKNIVLKLLKENNNVPSHSGSSDICKEMIYRSCRSCLDSLLALFRQAAELELADKSSSNKEPLLKHIALEADNLSWLLEILVNKQAADEFAVIWANQQELAVLHEKLPIVSRYHVSCISARLYVGIGRGELLPSKDTRQLVLQTWLQPLINDFCWLQHGCRSFDSKVVEEGIGRTILTLPLEDQQSIMLSWVGSFLKVGNKCPNLQKAFEVWWRRTFTKPYEEGQGKNNVGSDSFFNVV 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0087 535 MobiDBLite consensus disorder prediction 43 109 - -
Lele54g0087 535 Gene3D Potassium Channel Kv1.1; Chain A 124 250 IPR011333 -
Lele54g0087 535 MobiDBLite consensus disorder prediction 78 98 - -
Lele54g0087 535 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 120 521 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0087 Lele-ChrLele54 727906 730658 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0223 50 1323449 1331938 Lele54g0087 54 727906 730658 CCT
Lele51g0224 51 1257819 1266158 Lele54g0087 54 727906 730658 CCT
Lele52g0226 52 1343219 1351820 Lele54g0087 54 727906 730658 CCT
Lele49g0208 49 1237238 1240611 Lele54g0087 54 727906 730658 CCT
Lele54g0087 54 727906 730658 Lele54g0087 54 727906 730658 ECH
Lele54g0087 54 727906 730658 Lele55g1410 55 20402876 20405624 hybridization
Lele54g0087 54 727906 730658 Lele56g1344 56 16632593 16635574 hybridization