Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0068 ATGAGAGTTCCCGTTTCTTCATCTCCACAAGCATCCCTTAAACCCTCTCTCTCTAACAACAACAACAACTCAAACACCACCACCACCACCACCAACACAACCCTAAATATTTCTCTCCAGAGCCCTTCTTCCCATATCAACCCTTCTTTGTGCTACGAACCCACTTCCGTTCTCGACCTCTGCCGGAGCCCCAGCCCTCCCACGGATCACTCCGCCGTTATTGAGTCCGTGTCGAAGCCCCCCGAGGACTCTGTGGAGGTGGACGAGCATGCGTTTCACAGTCTGGATTGGGACTCCATTATGAAGGACTTGGATTTACATGACACTTCTTTGAAGAGTAGTATTCCTCAGCCGAATCCATGTGACCCTCAGGTCCCCATTCTCCCTGAGTTCTCTCCTTCCCAGGACCCATCACTGTTCGATCATGCTTCTGCGGATTTCAGTCTCTCAGATATTTACTCCAATCAGAATCTGGGATATAGCGTCAACGGTTTGGATAATTTGGTTTACGAGTTCAACCCTAACAGCAATTGGAGCAATACCGATTTTGATCTGATTGAAGTGCTTATCCGTGCGGCGGATTGCTTTGATTCGAACCAGCTTCATCTTGCTCAGGCTATACTGGACCGGCTTAATCAGAGGCTACGATCTCCCGTCGGAAAGCCTCTCCAGAGAGCTGCGTTTTATTTCAAAGAAGCCCTCCAATCTCTTCTCTCCGGGTCGAACCGTACCCCACGCGTTTCTTCTCTGTTGGAAATCGTGCAAAGCATCAAAACCTTCAAGGCGTTTTCTGGAATCTCTCCGATACCCATGTTCTCCATCTTCACCACCAACCAAGCACTCCTCGAAGCTCTTCATGGATCTTCTTTTGTGCACGTCATCGATTTCGACATCGGCCTCGGGATTCAGTACGCTTCGCTGATGAAGGAGATCGCGGAGAAGGCTGAATCGTGTAAAATCAACGGGCCGCTGCTCCGAATCACAGCCTTGGTGCCGGAAGAATACTCGGCCGAATGCAAGTTGATACGAGAGAACCTGAACCAGTTTGCCCTCGAGCTTAGAATCCGAGTCCAAGTCGAGTTTGTGCCGCTGCGGACCTTCGAGACGATGTCGTTCAAGGCTGTCAAGTTCATGGACGGAGAGAAGTCGGCCGTTCTACTATCACCTTCCATATTCCGCCGTCTCGGTTCAACCAACAACATGGCGGCGTTTTTGTCCGACGTTCGAAGGATTTCCCCGAGCGTGGTGATATTCGTAGATGGTGAAGGGTGGACGGAAGCGTCCGCAACTACGTCGTTTCGTCGGGGTGTGGTGAACAGCTTGGAGTTCTACTCGATGATGTTGGAGTCGTTGGATGCGTCAACTGCAGTGGGGGGAGGAGGCGACTGGGTCAGAAGAATCGAGATGCTTCTGCTGCGTCCGCAGATCATGGCCGCGGTGGAAGAAGCCGGCAGGATGGTGTCGCCATGGAGGGAGGTGTTTTACGGTGCCGGAATGAGGCCGGTGCAGTTGAGCCAGTTCGCTGATTTCCAAGCCGAGTGCTTGTTGGCCAAAGTTCAGATTCGAGGTTTCCAGGTGGCAAAACGACAGGCTGAGCTGGTGCTCTGCTGGCACGAGCGGGCCATGGTTGCCACATCGGCATGGCGGTGTTAG 1653 0.5239 MRVPVSSSPQASLKPSLSNNNNNSNTTTTTTNTTLNISLQSPSSHINPSLCYEPTSVLDLCRSPSPPTDHSAVIESVSKPPEDSVEVDEHAFHSLDWDSIMKDLDLHDTSLKSSIPQPNPCDPQVPILPEFSPSQDPSLFDHASADFSLSDIYSNQNLGYSVNGLDNLVYEFNPNSNWSNTDFDLIEVLIRAADCFDSNQLHLAQAILDRLNQRLRSPVGKPLQRAAFYFKEALQSLLSGSNRTPRVSSLLEIVQSIKTFKAFSGISPIPMFSIFTTNQALLEALHGSSFVHVIDFDIGLGIQYASLMKEIAEKAESCKINGPLLRITALVPEEYSAECKLIRENLNQFALELRIRVQVEFVPLRTFETMSFKAVKFMDGEKSAVLLSPSIFRRLGSTNNMAAFLSDVRRISPSVVIFVDGEGWTEASATTSFRRGVVNSLEFYSMMLESLDASTAVGGGGDWVRRIEMLLLRPQIMAAVEEAGRMVSPWREVFYGAGMRPVQLSQFADFQAECLLAKVQIRGFQVAKRQAELVLCWHERAMVATSAWRC 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0068 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 135 544 IPR005202 -
Lele54g0068 550 Pfam GRAS domain family 185 549 IPR005202 -
Lele54g0068 550 ProSiteProfiles GRAS family profile. 176 549 IPR005202 -
Lele54g0068 550 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0068 Lele-ChrLele54 562073 563725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0068 87 549 GRAS Transcription Factor Family AT4G36710 54.321 2.66e-169 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele54g0068 GRAS 7.7e-87 CL0063