Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0061 ATGGTGGTGGTGCTTGGGTTGCAGTATGTGGAGCAGGGTTACATCCCTGGTTCTCTCCAAGGTTTCTCAGTGTTTGTGAGAGGAGCAGCTAGGGGAAAGAATATAAATAGAATGTCTTCCTCGTCCCCTGAAACTGCTCCATCTTCAGATTCTGGTAATGATGGTGATGACTTCACCGGAGATTCATTATCACAAAGCCCTCCATCACCACCACCACCAGCCCAGCATAATCCTACTACCGATCTAGTTGTTTTTTCACTGCCGCCGCCGCCGCCGCCTGGCTCTTCTGGCTCCAATAATAATTCCTATTCTGGTTCGCCGAACAACCAAGGCTCTCCTGGTGACAAATCGCAATCTCCGTCTTCTTCAAGTCCTTCATCACCGAATAAATCGTCGAATCCTGGTTCATCCTCAACACCAAAATCTTCCCACGGGAACAAGCATTCACCTCCTCCACTATCTGATTCCAGTGAAAGTAGCAGCGGAAATGACGACAGTGGAACAATTATCGGAGCCGCCGTTGGTGTAGGGTTTGTTCTTCTTATTATGATCATCGTCTGTATCATTTGCTGCAGAAAGAAGAAGCGAAAGCAAAGGTATTACTATAGCGACGATGGCAAACCCGGCAAGGCTGTAAGTGGTTATTACAACAGAGGACAGCACCCAAATAACTGGCACCATGGTGGTAATGACCATGTTGTGAGGATGCAGCAATCACCGGGCGTGGGCATGGGTATGGGTCCGGACAGTGGTGGGTGGGGCCCAGTTCCACCGCCACACAGCACAGACATGAGTTCCAATTACTCGTTGGGGCCACCAATGCCTCCGCCTTCGCCAGGGCTGACTTTAGGGCTGAACTGCGGGACCTTCTCTTTTGAAGACTTGGCAGCGGCAACGGAGGGCTTTACAGATAAGAATCTGATAGGACAAGGAGGTTTTGGTTACGTGCATAAGGGTGTTTTGCCTAATGGAAAGGAAGTTGCAGTGAAGAGCTTGAAAGCTGGTAGTGGCCAAGGAGAGCGTGAGTTCCAAGCTGAGATTGAAATCATTAGTCGTGTTCATCATCGCCATCTTGTGTCGCTTAATGGCTACTGTATTGCTGGTGGTCAACGAATGTTGGTTTATGAATTTGTTCCCAACAACACTCTTGAGCATCACCTTCATGCAAAGGGTTTGCCTACCATGACTTGGCCTGACAGAATGAGAATTGCAGTAGGATCTGCCAAAGGGCTTGCATACCTTCATGAAGACTGTCACCCTCGAATTATCCACCGTGATATCAAATCTGCCAATGTCCTACTTGATGATAGCTATGAAGCTAAGGTGGCTGACTTCGGATTGGCTAAGTTAACTACTGATAATAATACTCATGTCTCAACTCGAGTCATGGGAACATTCGGGTACTTGGCTCCAGAATATGCGTCAAGTGGAAAATTGACTGAGAAGTCAGACGTGTTCTCTTTCGGAGTGATGTTGTTAGAAATTATAACAGGGAAGAGACCTATAGATATCCAAAATATGGTGGACGATAGTTTAGTAGACTGGGCTCGACCACTCTTGGCAAGAGGGCTTGATGATGGCAACTTTGAAGAACTGGTGGATCCGTTCTTGGAAGGAAATTACAATAACCAGGAATTGTCTCGCATGGCTGCCTGCGCTTCTGCCAGCATTCGTCATTCCGGCAAAAAACGTCCTAAAATGAGCCAGATCGTAAGAGCGCTGGAAGGGGATGTGTCACTGGACGACTTAAACGATAAGGCAGGGCATCATGGGCACCTTCTTGCATCTTCATCGAGCTCAGAGTACGATTCAAGTGCGTATCAGGCCGATATGAAGAGGTTCAGACAGTTAGCTCTGGCGAGTCAGGAATTCGGAAGCAGTGAATCAAGTGGTGAAATGTCTCAGGTTAGCCAGAAGCAACATCTTTAG 1929 0.4774 MVVVLGLQYVEQGYIPGSLQGFSVFVRGAARGKNINRMSSSSPETAPSSDSGNDGDDFTGDSLSQSPPSPPPPAQHNPTTDLVVFSLPPPPPPGSSGSNNNSYSGSPNNQGSPGDKSQSPSSSSPSSPNKSSNPGSSSTPKSSHGNKHSPPPLSDSSESSSGNDDSGTIIGAAVGVGFVLLIMIIVCIICCRKKKRKQRYYYSDDGKPGKAVSGYYNRGQHPNNWHHGGNDHVVRMQQSPGVGMGMGPDSGGWGPVPPPHSTDMSSNYSLGPPMPPPSPGLTLGLNCGTFSFEDLAAATEGFTDKNLIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIEIISRVHHRHLVSLNGYCIAGGQRMLVYEFVPNNTLEHHLHAKGLPTMTWPDRMRIAVGSAKGLAYLHEDCHPRIIHRDIKSANVLLDDSYEAKVADFGLAKLTTDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLEIITGKRPIDIQNMVDDSLVDWARPLLARGLDDGNFEELVDPFLEGNYNNQELSRMAACASASIRHSGKKRPKMSQIVRALEGDVSLDDLNDKAGHHGHLLASSSSSEYDSSAYQADMKRFRQLALASQEFGSSESSGEMSQVSQKQHL 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0061 642 CDD STKc_IRAK 308 576 - -
Lele54g0061 642 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 175 617 - -
Lele54g0061 642 FunFam Proline-rich receptor-like protein kinase PERK1 378 585 - -
Lele54g0061 642 SUPERFAMILY Protein kinase-like (PK-like) 278 574 IPR011009 -
Lele54g0061 642 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Lele54g0061 642 MobiDBLite consensus disorder prediction 623 642 - -
Lele54g0061 642 Pfam Protein tyrosine and serine/threonine kinase 306 571 IPR001245 GO:0004672|GO:0006468
Lele54g0061 642 MobiDBLite consensus disorder prediction 97 165 - -
Lele54g0061 642 MobiDBLite consensus disorder prediction 35 64 - -
Lele54g0061 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Lele54g0061 642 Gene3D Transferase(Phosphotransferase) domain 1 378 588 - -
Lele54g0061 642 FunFam proline-rich receptor-like protein kinase PERK1 280 377 - -
Lele54g0061 642 Gene3D Phosphorylase Kinase; domain 1 282 377 - -
Lele54g0061 642 ProSiteProfiles Protein kinase domain profile. 302 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0061 642 MobiDBLite consensus disorder prediction 35 165 - -
Lele54g0061 642 SMART serkin_6 302 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0061 Lele-ChrLele54 518662 523486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0061 122 634 Trihelix Transcription Factor Family AT1G70460 48.664 1.09e-149 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele54g0061 PK_Tyr_Ser-Thr 2e-47 CL0016