Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0041 ATGGCACATCACAGGATGCAATCCGTAGGGTTTGGAGAAGAAATCAAATCTTCTTCTTCTTCTTCTTCGAGAATAAAACATCCTAGGGTTAAGAATTATGGCACTCTAAGTGGTAAAGTAAGGCAGGATCAAACATGGAAAGATAAGCATATGACTGCTTCAATAGGAAGAATCAACGAAATGGTTGCAGAGGCAACACTTTCTAAGAATCCCCAAGGGCATACTTCATTAACAGGCTCCACAGGGGCCATTAAATCATCTGCTCCTGTTTTCTTTTCAAATCCAACCGACAAGAGGATCCGAAGCAGATCATCATCGTTCAGTTCTAGTATTGGAATATCTGCACTGTCCAGCTCCTCTGCGACGAGCAGGGAGGATACTGGGAAGAGCGATTCTGGAGGGAAAAAACCCGAGAAGAAGAAGAAGAAGAACAAGAAGGAGAAAGGAGCATTGTTTGCATGTATGGGACAAGAGTCATGCACGAACGTCTCAAGAAGATCGCCGGAACGTGCAAGAGTGGATGAAGCATTGATCATCGAGAGAGCGTGCGTAGTGGAGAGTCTGCCACAATTCTGGGCAGATAAGTATCAACCAACTTCACTCAGTGCCTTCGTTTGCCACAAACAAGAAGCTCAACTTCTCAAGGAATTAGTGTGTCTTGATAAATTTCCACATACTTTGCTGAAAGGTCCTTCTGGTTCTGGGAAAAGAGCCTTAGCAATGGCTCTTCTGCGAGAATTATACGGTGAAGAGTGTTGGAACGATGAAGGAAGGCCTATGAAAGTAAGTGTTCCAATAGCGTTCAGTTGTCATCACGTGGAACTAAACGTAAATTTGGAACGCAATGCTAAGTACGCCTTGATTGGATTAGTGAAGGAAATGAGCCGTATCTATGAAATAACACCCCAAGATCCCAATCTTAATATCAAGTCAGATTGTCAAGTGATGGTTCTCTATGAGGTTGACAAAGCAGAAGAGGATATCCAGCAGATAATCCAGTGGATTATAGACTGCCACTCCAAAACATGCAAACTAATGCTCTGCTGCCAAGACGATGTTGACATTCCTGAGTCTGTGAGGAACCTGCTCAAAGTTATTGAAGTTCATCCCCCTACTACTCCTCAGATTATGGAGGTTCTGTTTGAGATAGCAAAGGAGGAGGATATTCATCTATCAAAGAATTTTGCTGCTATGATTGCTTCAAAATCTAATCAGAATCTCAGGCAAGCTATCATGGCTCTTGAGGCATGCAAAGCATTCAAATATCCGTTTTTGGAAGAACAACCAATTTCAATTGGATGGGAGGATGTTGTCATAGAAATTGCTTCAGAGATCATAGCTGATCCATCAAATTCATGCCAAATCTCAGACAAAAGACTCCCGCCTGGAACTATAGCTTTAACCAAGTTAGCTGGTAAAGACATCCAAGCCCTTCTGTCAAGAAAATAG 1449 0.4251 MAHHRMQSVGFGEEIKSSSSSSSRIKHPRVKNYGTLSGKVRQDQTWKDKHMTASIGRINEMVAEATLSKNPQGHTSLTGSTGAIKSSAPVFFSNPTDKRIRSRSSSFSSSIGISALSSSSATSREDTGKSDSGGKKPEKKKKKNKKEKGALFACMGQESCTNVSRRSPERARVDEALIIERACVVESLPQFWADKYQPTSLSAFVCHKQEAQLLKELVCLDKFPHTLLKGPSGSGKRALAMALLRELYGEECWNDEGRPMKVSVPIAFSCHHVELNVNLERNAKYALIGLVKEMSRIYEITPQDPNLNIKSDCQVMVLYEVDKAEEDIQQIIQWIIDCHSKTCKLMLCCQDDVDIPESVRNLLKVIEVHPPTTPQIMEVLFEIAKEEDIHLSKNFAAMIASKSNQNLRQAIMALEACKAFKYPFLEEQPISIGWEDVVIEIASEIIADPSNSCQISDKRLPPGTIALTKLAGKDIQALLSRK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0041 482 MobiDBLite consensus disorder prediction 68 104 - -
Lele54g0041 482 Gene3D - 374 424 - -
Lele54g0041 482 FunFam replication factor C subunit 3 372 430 - -
Lele54g0041 482 Gene3D - 190 371 IPR027417 -
Lele54g0041 482 MobiDBLite consensus disorder prediction 1 48 - -
Lele54g0041 482 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 189 452 - -
Lele54g0041 482 MobiDBLite consensus disorder prediction 118 148 - -
Lele54g0041 482 MobiDBLite consensus disorder prediction 12 28 - -
Lele54g0041 482 CDD AAA 209 247 - -
Lele54g0041 482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 419 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0041 Lele-ChrLele54 379048 382903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0041 191 450 Core DNA Replication Machinery Family AT5G27740 35.531 2.23e-46 163