Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0027 ATGCTCTCCGTCGCTGCGCTCTCTATGCTTGACATGCTCTCTGTTGGGGAAGAAGAGGAAGAGAACTTCCTGTGTTCACATCAGATCAATCTCCTCCGTTTTCGAAACAGCCCTCCACAGCCTCCGGTAGTCTCTGGAGGAGCAGCTGCCGAGATGTCTGAGGTTGCTGTATCAATAGTTGTTGAAAAGCTTTCAGAACTTCTATTTGAACAAGCCGTGAACGCAGTTTCTGCACTAGATGGTGTGCGCAACGACGTAGAGAGGCTGAAGAATGAGTTACGATGGATGCAAGGCTTTCTGAGGGATGCCGATGCTAAACAAGAAGAAAACCAACTGGTTCGCATGTTGGTTTCCGATATTAGAGATATTGCTTTTGAAGCCGAGGAGCTAATAGAGATTTATGTTTACAAGGTAGCGTGTCACAGTAGATGGGACAGAGTCTTTAGATCCTTACATCTCTACGAGGTCTCCAGAAAAATCGAGAAAATTAGACAGAGGATACATGATGTATCTAAAAAACGAGAAACCTACGGCGTTGTCAGTGAAATACGGGGGCGCAATATTACCAACGAAAGGTTGAGGCACTGGAGACAGCCATGGCCCTACACTGAAGAGGAGTGTGTAATTGAGCTTGAAGATGACATGGAATTCCTGCTCGATCAACTGCTTACAGTGGACGCTGGGCGGGTGGTTTCTATAGTTGGCATGGGGGGTTTGGGCAAAACCACCTTAGCTAAGAAATTGTATAATCACAGCAGAATTCATAACCATTTTGATTGTAGAGCTTGGGTTTATGTGTCCAAAGAGTACAGAAGAAGAGACATTCTGCTAGGAATTCTCAAGGATGCAGATGCTCTCAATCGAAATGAAATTGACAGATTGGAGAGATTGCGGGAGGAAGACATGGTGAACCGGCTACATTCTATCTTGGATGAGAAAAGGTATTTGGTAATTCTTGATGATATTTGGAGCATGGAAGTTTGGGATAGCCTAGAATCTGCATTTCCCAGAGGGAAGATGGGTAGTAAAATTCTGCTCACAACCAGAGATATGAAAATAGGTAAGCATGCTGGCGGTGGGGGCAACACTCATAAACTACGAACACTGACTGAAGACGAGAGTTTGAGATTACTATGCTACAAAGCATTTCCTGGAATGAATAGCATTCCCCCGGAGTTGGGGAATCTTGCAAGGGATGTTGTAGTGAAATGTGGTGGTTTGCCTCTGGCTGTGGTGGTGCTTGGTGGTTTATTATCTAGAAGGCTTGAATCAAACGAGGAATGGTTGCGGGTGGCGGAAAATATCAGTTGGCATCTGCTGAATGAGCAAGACAGAATACGGGGTATTTTGGCCCTGAGCTACAATGACTTGCCTTCTCACTTGAAATCATGCTTTCTCTATCTAGGCCTTTTCCCAGTTGGCATGAACATTCAGACCAAAAAGTTGATTCGCCTGTGGGTCGCAGAAGGTTTTTTACCACAAGAAGGTGCAGAAACAGCGGAAGGTGTTGCTGAGAACTGCTTAAATGAGTTGATTGGTAGGTGCATGGTTCAAGTGGGCTCAGTAAGTTCCTTAGGCAAAGTCAAAACAATTCGCATCCATGATCTTCTCAGGGATATTTCCGTCTCCAAAGGGCAAGAGGAATATTTTCTTCGCATATATCTTGGCAGCCTGGAGAGTTCATCAGCATCTCAGGTAAATAGATCCCGCCGGCATGCCATACATTCTTGCTATGACCGTTATGACTTCTTGAAACACAATGCTCATCATTCACGTTCCCTCCTCTTCTTCAATAGAGAATATAATGCAGATATAGTGAAGAGAATAAGGTTCTATGACCAGCAGTACAATATGAATTTCCTGCTAGAAAAGAAACTGAATTTAATTTTTAGCAAATTCAAGCTTCTCAGGGTTTTAGAGTTAGATGGTGTTCGGGTTGTTCGCCTGCCGAACACAATAGGGGACCTTGTTCAATTAAGGTATCTTGGATTGAGGAAGACTAATTTGGAAGAGGAACTTCCACCTTCCATTGGAAACTTGCTGAACCTGCAGACGCTTGATTTAAGGTACTGCTGTTTTCTTAAGAGGATACCAAATGTGATTTGGAAGATGATTAGTTTGAGGCATTTGCTTCTGTATACTCCATTTGATTCTCCAGATAGCTGTCATCTAAGAATGGATACATTAACCAATTTACAAAGCCTGCCATACATAGAAGCTGGAAACTGGATAGATGGGGGTCTAGAAAAAATGAGAAGTCTCAGGCAATTGGGAATATATGAATTACCTGGAAAATTGGTGAGGTCAGTGCTTTCTATTGCACAAGGATTACTTCACCTTCACTTGCTGTCTCTATCACTTCAATCTGAAGAAGATGAATTTCCAATCTTGATGCAGCTTTCTCAGTGCACTCATCTCCACAAGCTCTCTTTGAATGGGAGGATCAAGAAGCTACCTGACCCTTATGAATTCCCGCCAAACCTTATCAAACTAACATTACATAACTCCCATTTACAGATGGAATCCATTGCCAAACTTGAGAGGTTGCCAAAACTGAGAATGCTTGTTTTAGGGAAAGGGGCATACGATAGGCGGGAATTGATCTTCTCTGCTGATGGATTTCCAAAATTGCAAATTCTAAGGCTTAATGTTTTGAAAGAATTGGAGGAGTGGACCGTTGAGGAAAGGGCAATACCGAGACTCGAGCACATCATTATTAATCGCTGTGAGAAGCTGAAGAAGATCCCAGAAGGACTGAAGACTCTTTCTTCTCTCAAGGAAATAAAAATTATAGGAATGCCTGTAGAATTTGAACAGAGACTACGAACTAAAGACTTGCTGGAATTCCAAAATACCCCTTCAATTGAATCAACTACAGACATTTTGGCTAATGGTAAGCTAAATATTCATCTCTGA 2916 0.4273 MLSVAALSMLDMLSVGEEEEENFLCSHQINLLRFRNSPPQPPVVSGGAAAEMSEVAVSIVVEKLSELLFEQAVNAVSALDGVRNDVERLKNELRWMQGFLRDADAKQEENQLVRMLVSDIRDIAFEAEELIEIYVYKVACHSRWDRVFRSLHLYEVSRKIEKIRQRIHDVSKKRETYGVVSEIRGRNITNERLRHWRQPWPYTEEECVIELEDDMEFLLDQLLTVDAGRVVSIVGMGGLGKTTLAKKLYNHSRIHNHFDCRAWVYVSKEYRRRDILLGILKDADALNRNEIDRLERLREEDMVNRLHSILDEKRYLVILDDIWSMEVWDSLESAFPRGKMGSKILLTTRDMKIGKHAGGGGNTHKLRTLTEDESLRLLCYKAFPGMNSIPPELGNLARDVVVKCGGLPLAVVVLGGLLSRRLESNEEWLRVAENISWHLLNEQDRIRGILALSYNDLPSHLKSCFLYLGLFPVGMNIQTKKLIRLWVAEGFLPQEGAETAEGVAENCLNELIGRCMVQVGSVSSLGKVKTIRIHDLLRDISVSKGQEEYFLRIYLGSLESSSASQVNRSRRHAIHSCYDRYDFLKHNAHHSRSLLFFNREYNADIVKRIRFYDQQYNMNFLLEKKLNLIFSKFKLLRVLELDGVRVVRLPNTIGDLVQLRYLGLRKTNLEEELPPSIGNLLNLQTLDLRYCCFLKRIPNVIWKMISLRHLLLYTPFDSPDSCHLRMDTLTNLQSLPYIEAGNWIDGGLEKMRSLRQLGIYELPGKLVRSVLSIAQGLLHLHLLSLSLQSEEDEFPILMQLSQCTHLHKLSLNGRIKKLPDPYEFPPNLIKLTLHNSHLQMESIAKLERLPKLRMLVLGKGAYDRRELIFSADGFPKLQILRLNVLKELEEWTVEERAIPRLEHIIINRCEKLKKIPEGLKTLSSLKEIKIIGMPVEFEQRLRTKDLLEFQNTPSIESTTDILANGKLNIHL 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0027 971 FunFam Probable disease resistance protein At1g61300 192 360 - -
Lele54g0027 971 Gene3D - 454 544 IPR036388 -
Lele54g0027 971 Gene3D - 55 175 - -
Lele54g0027 971 SUPERFAMILY L domain-like 533 952 - -
Lele54g0027 971 PANTHER DISEASE RESISTANCE PROTEIN RP 79 910 IPR044974 GO:0006952
Lele54g0027 971 Gene3D Ribonuclease Inhibitor 604 960 IPR032675 -
Lele54g0027 971 CDD RX-CC_like 53 172 IPR038005 -
Lele54g0027 971 Pfam Rx N-terminal domain 56 143 IPR041118 -
Lele54g0027 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 468 IPR027417 -
Lele54g0027 971 PRINTS Disease resistance protein signature 230 245 - -
Lele54g0027 971 PRINTS Disease resistance protein signature 309 323 - -
Lele54g0027 971 PRINTS Disease resistance protein signature 404 418 - -
Lele54g0027 971 PRINTS Disease resistance protein signature 678 694 - -
Lele54g0027 971 Coils Coil 72 92 - -
Lele54g0027 971 FunFam Probable disease resistance protein At1g63360 454 543 - -
Lele54g0027 971 Pfam NB-ARC domain 212 455 IPR002182 GO:0043531
Lele54g0027 971 Coils Coil 280 300 - -
Lele54g0027 971 Gene3D - 368 453 IPR042197 -
Lele54g0027 971 Gene3D - 194 358 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0027 Lele-ChrLele54 276083 279810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0027 229 540 WRKY Transcription Factor Family AT5G45050 23.750 1.84e-08 56.6