Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0024 ATGGCGGGTTTATTTTCACTAGGCGGTGGAGGTAGAGGAACAAGCCAGCAGCAAGAAGAAGAAGAAGCACGAGGGCATCATAACCTAACCACGGAATTCCCTCCGGCCGAGACCCTATACTGGTACAAGAACGAGGATGCATCGTCGTACAGAGGATTGGAGCTATGGAACCAGCGGCAGGAGCAGTTCATGGCGGGAGAACAAGTGTACGATGATCCGTCGTCCAATATTACTGTCCCAGTTTCTGTTCTGCGAATCACTCCTGAGCAAAGAGAATCTTGGAGAGTGATCGAGGATTTTCCTGCAGTACTAAGCTCGCCTGCGGATTTCCGATGCGTGCGGGTGAACTCCATTGACGACGCGGACGAACAATTTGCATACCAGACGGCGGTGAACATTGGAGGGCATGTGTTCAAAGGAATTCTGTACGACAAAGGTCCTGAATATAATTACACAGCAGCTGGAGATGTGAGCGCTCACGCCGGCGTAGGCGGAGTTCAACCATTGAACCTCATGGCCGGTGCCACCAGCGGCGCGTCTGTTTTGGCCGCGAGCTCAATAAGTGGCGGTGCCATGGTTCCTCCAAGTGGGGCGCTTGGGGATGCTTCTTTGTATCCAGCTCCATTTGACCCCTTCATGGCTGGAGGCAGTGGAGCAGCATTCAAGTTTAAAAGGAAAATGTTAACATTTCATGAAGGCATTGCATCCTTCTTGACGGATAGAGGGTATGGGTTTCCACTTGTGCAAAGCATTATGAAGAGGCTTACTTAG 771 0.5123 MAGLFSLGGGGRGTSQQQEEEEARGHHNLTTEFPPAETLYWYKNEDASSYRGLELWNQRQEQFMAGEQVYDDPSSNITVPVSVLRITPEQRESWRVIEDFPAVLSSPADFRCVRVNSIDDADEQFAYQTAVNIGGHVFKGILYDKGPEYNYTAAGDVSAHAGVGGVQPLNLMAGATSGASVLAASSISGGAMVPPSGALGDASLYPAPFDPFMAGGSGAAFKFKRKMLTFHEGIASFLTDRGYGFPLVQSIMKRLT 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0024 256 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 100 147 IPR006511 -
Lele54g0024 256 MobiDBLite consensus disorder prediction 1 30 - -
Lele54g0024 256 Pfam Domain of unknown function (DUF702) 90 148 - -
Lele54g0024 256 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 93 209 IPR007818 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0024 Lele-ChrLele54 251511 254477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0024 100 217 C2H2 Transcription Factor Family AT1G19790 45.238 8.43e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lele54g0024 DUF702 8.4e-23 No_clan