Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1456 ATGGGAAAGGAAGACATCCTCTTCTCACTTGTCCATGGATCAAAAACTAGTGCTGGGGGGAAGCCTCTTCATTGGACATCATGCCTCAAAATTGCTGAAGACCTAGCAACTGGACTTGTGTACATCCACCAGAACCCTGGCTTAACCCATGGGAACCTGAAATCTTCCAATGTGTTGTTAGGTTCGGACTTTGAGTCATGTCTTACAGATTATGGCCTCCAAGTGTTACTTAATCCAGATTCACTTGAAGAACCTAGCGCCACCACTTTATTTTACAGAGCACCGGAGTGCCGTAGCATCCGGAGGCCTCCCACTCAGCAAGCTGACGTATACAGCTTTGGGGTACTTCTGCTGGAGCTTTTAACCGGGAAAACACCCTTCCAAGACCTTGTTCTGGAACATGGTTCGGATATACCTAGGTGGGTTCGGTCCATGCGGGAAGAAGAGACAGAGTCCGGGTCCGGGGATGCCCCTGCCTCAGGGAATGACGCCTCAGAAGAGAAGCTTCAAGCTCTTTTGAACATTGCAATGGCGTGTTTTTCGCTAGTACCAGAAAACAGACCAACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGTCGAGGCCCAAGTGTCATCAAATAGTAGTGATCATTCTCCAGGCAGATGGTCAGATACTGTGCAAAGCTTGCCTCGGGAAGATCATCTTAGCATGTGA 702 0.4786 MGKEDILFSLVHGSKTSAGGKPLHWTSCLKIAEDLATGLVYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLQVLLNPDSLEEPSATTLFYRAPECRSIRRPPTQQADVYSFGVLLLELLTGKTPFQDLVLEHGSDIPRWVRSMREEETESGSGDAPASGNDASEEKLQALLNIAMACFSLVPENRPTMREVLKMIRDARVEAQVSSNSSDHSPGRWSDTVQSLPREDHLSM 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1456 233 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 203 - -
Lele53g1456 233 SUPERFAMILY Protein kinase-like (PK-like) 15 201 IPR011009 -
Lele53g1456 233 MobiDBLite consensus disorder prediction 205 233 - -
Lele53g1456 233 Pfam Protein kinase domain 27 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1456 233 Gene3D Transferase(Phosphotransferase) domain 1 5 221 - -
Lele53g1456 233 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1456 Lele-ChrLele53 22404751 22412062 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1456 7 233 Receptor kinase-like Gene Family AT1G60630 72.807 2.09e-110 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele53g1456 Pkinase 4.9e-21 CL0016