Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1452 ATGGTGGTGATCATGCAGCAGCAGCAGAATCCCTCTGCACTGTTTCCACAGCTCAACAACAATCCTCAGTCCTCCTCTGCCACCACCTCCTCCTCCCTTAGGTCGCCGCCTTCTGCAACACCACCACCACAGTCCCAGTTATCTTCCTCACTCCCTCTTGTTGCTCCTCCCTCCGCTCCACCCCGTCAAACTCATCTGCCATCACTGCCACCCGATCATGTAATTGGACCAGTGGTGCCCATCGCCGCCACGCACCCTTCCGGCGAGCCCGCTTTGATAGCGCCACCTGCCTGCCCGTTGCCAAGAGTCCGACTCTCGGATATTGCCCAATATGATGGAGCTCCAGCTGGGTCCTATGTCAGAGCAGTGGAAGCACTGTCAGGGTCTTTGATGAGGCATAATGCAGCCTTGATCGAATTGGGCAGCGAGGATACCGCTCTGATGAGGTGCGGCTTGGAAGGTTCGAGATTGTTCTTTTGGAGCAGGGCCCATCTGGGTGGGGGGAAGGGAAGCCGTGGGGTTCACATGTACAGGGCAGGAAGGGCTTTGGAAGATTGGGATTCATCTCCCCCATGTATGGCTGATATTTTTAGGTGCATGGGAAAGGCAGCTCGTTCTACATTGTGTGCCATTGCAAGGCATCTTCGTCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATACCCCATTGCCTGCTAATGAGGTGTCCTCATCAGTTCTTGTTGCAACCTACTCACTCACTTCTTTGCCAAACGGAAAAGGTGCTATTGGAGGTGGTAAGCCAACCGTGAATGGTGAGATTGAGAAGGGTTTATTGACATTGATATCTTCAGACGCTCCTGGTCTTCAGGTTTGTGACCCCAATGGCCGCTGGTATCTGGCAGATAGTGGGTCCGGTCCTGGGGATCTTTTGTTGCTCACAGGCAAGGCACTTAGCCAAGCCACCGCAGGTCTTCGTCCTGCAGCATCATATAGAGCTTCTCCTGATTATTTTGTAGGCGCTAACAGTGGAGGAAGGACATCTTTTGCATTTAGACTCATGCCACAGGGCAACGCTATATTGGATTGTTCTCCAATTGCAGCAGCTGGACATGTTATTCCCCAAAGCTATGTTCCAATATCAGTAAGCCAGTTTATGGATGACCTTTCTGCTGAAGAAGTGATAGGCAGCCGATCTTATCATACTTATGTTGCTGGAAACAATGTGAATAAGGAACAGTCATTGAGAAGTGTTCTGTCAGATCCTTTGTCTGGTGCATTCCTTGAAGACGCCATGCTTGTCTCGTGTGGGCATTCTTTTGGTGGACTCATTCTAAGGAGAGTCATTGAAACTTCAAGATGTACTCTCTGCAATACAAATATTGAGACCAGTTCTCTGATCCCCAATTTTGCTCTAAGAGCAGCAGCCACAGCTGTCAAGCATGAGGACGATAGAAGGTTATTTCATAATGCTGTTCTCCGAAAGCGCAGGAAAGAAATGTGTGATCAAATGGATTCACTGAGAAGAACAAACAGGGATAATGGTGATGTTACTGGTGATGATAGACCCCACCGGGGAGTGCAGTATCCTTTTTCTGTAAATGAGAAGGTGATAATTAAGGGTAATAGGAGAACACCAGAAAAATTCGTTGGCAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTTAAGATTATTGGAACTGGGGAGAATGTGCGCTTGCAATACCGTTCTCTTAGGAAGCTATTGAACTCACCAGCGATGGAGGACCAGTCACAGCCAGTTCAAAATAGCAGCTCTTAA 1797 0.4864 MVVIMQQQQNPSALFPQLNNNPQSSSATTSSSLRSPPSATPPPQSQLSSSLPLVAPPSAPPRQTHLPSLPPDHVIGPVVPIAATHPSGEPALIAPPACPLPRVRLSDIAQYDGAPAGSYVRAVEALSGSLMRHNAALIELGSEDTALMRCGLEGSRLFFWSRAHLGGGKGSRGVHMYRAGRALEDWDSSPPCMADIFRCMGKAARSTLCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATYSLTSLPNGKGAIGGGKPTVNGEIEKGLLTLISSDAPGLQVCDPNGRWYLADSGSGPGDLLLLTGKALSQATAGLRPAASYRASPDYFVGANSGGRTSFAFRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEEVIGSRSYHTYVAGNNVNKEQSLRSVLSDPLSGAFLEDAMLVSCGHSFGGLILRRVIETSRCTLCNTNIETSSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMCDQMDSLRRTNRDNGDVTGDDRPHRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLLNSPAMEDQSQPVQNSSS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1452 598 SUPERFAMILY Clavaminate synthase-like 186 359 - -
Lele53g1452 598 MobiDBLite consensus disorder prediction 1 72 - -
Lele53g1452 598 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 407 477 IPR013083 -
Lele53g1452 598 SUPERFAMILY RING/U-box 409 475 - -
Lele53g1452 598 MobiDBLite consensus disorder prediction 1 35 - -
Lele53g1452 598 Gene3D - 172 389 IPR027443 -
Lele53g1452 598 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 98 595 - -
Lele53g1452 598 Coils Coil 484 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1452 Lele-ChrLele53 22351295 22359565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1452 409 587 Plant U-box Gene Family AT5G05230 40.556 2.56e-38 143