Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1451 ATGCTCCGAACCCTAAACAAAGATCTCATTCCTGCCTATCCTCTATCTTCCTGGGCTGTCAGACACTACACTCGTCTCCCTGTCCTTTTGGGCTCAATTTCTCCGTCGTCTCATGTAACTAGATTCTGCTGTGTGCCTGTTTTTGGGCTCTGTGCCAAGAATTTCTCTGATCGAACTGTTGGCTTTGTTGGTACAGGTTTGAACTTGGATAAGGAAATCTGGTATCTAATGAGTACTCGGGCACTCAGGGTTACTGCTGTCAGAAGTTATCGGCGGAGGAAGACAGCTCTGGACTTGGACCTTAACCAGGTCCCGCCTGGTGAAAGTCAGGAGCTGGAGGGACCTTCAACTCAGCTAGGGCCTCAGTTAGTTCAAGCTAGTCTTCAACCGCAGGTTGTACAACCTGCAATGATTGATGTTGAGGCCATCGATGATGATGTTGTTGAATCTACTCCCCGGGCTTTTGCTGAGGCTAAAAACAATTCAAGGAGAAATCGCAGCAGCGCTATAGTTGATGTGGATTTAGAAGATCGGACTAGGGTAACTAATAATAATCGCAACAAACGCAGAAGAGATTCTCGAAGCCAAACATTTATTAACTGTGATCTTTATATAAACTTGGAAGGCAGTAGCGGCTCTATGAAAGATGACGTTAGGGAGTCTCCTGAACCTCCCAAAGAACCTGTTTTCAACTGCCCAATATGTATGGGTCCTTTGGGAGAAGAAATGTCGACAAGGTGTGGTCACATTTTTTGCAAGAGTTGCATTAAGGCTGCAATAAATGCACAGGGTAAATGCCCTACCTGTAGGAAAAAGGTCACTGCGAAAGAGCTCATAAGGGTTTTTCTCCCATCAACTGGTTGA 864 0.456 MLRTLNKDLIPAYPLSSWAVRHYTRLPVLLGSISPSSHVTRFCCVPVFGLCAKNFSDRTVGFVGTGLNLDKEIWYLMSTRALRVTAVRSYRRRKTALDLDLNQVPPGESQELEGPSTQLGPQLVQASLQPQVVQPAMIDVEAIDDDVVESTPRAFAEAKNNSRRNRSSAIVDVDLEDRTRVTNNNRNKRRRDSRSQTFINCDLYINLEGSSGSMKDDVRESPEPPKEPVFNCPICMGPLGEEMSTRCGHIFCKSCIKAAINAQGKCPTCRKKVTAKELIRVFLPSTG 287
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1451 287 ProSiteProfiles Zinc finger RING-type profile. 232 270 IPR001841 -
Lele53g1451 287 SMART ring_2 232 269 IPR001841 -
Lele53g1451 287 Pfam Zinc finger, C3HC4 type (RING finger) 231 269 - -
Lele53g1451 287 SUPERFAMILY RING/U-box 231 276 - -
Lele53g1451 287 ProSitePatterns Zinc finger RING-type signature. 247 256 IPR017907 -
Lele53g1451 287 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 208 285 IPR013083 -
Lele53g1451 287 PANTHER ELFLESS, ISOFORM B 77 286 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele53g1451 Lele-ChrLele53 22335477 22338363 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1451 77 286 C3H Transcription Factor Family AT5G48655 50.472 3.98e-51 165