Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1445 ATGTGTGACCCACGATCCATAGGCAGTGATTCTCAACAAGTAGCAACTATGTTGTTCATAAAAAAGGATGTGGTTGTTAACATTGAAGACATTGCTAGTCATGCTAGCCTTTTAAAGCGCTTTTCTATGATGTATCTCTCCTTTAGTCCTTTAATTACTTCTGAAGTTAGGGATGAGTCTAGGCTTAGATCTTTGTCCAATGGTCAACGGGGAGAGGTATATGGGGTGGAAGGGGATCAAGTTGCTGTCATCATGGACATTACGGAAGAGAATAAAAAGGAGGGTGAGGTGGAGAAATCTAATGAACATACAGAATCACGACTTTGTTGGATACATGTTAAGGACATTGAGCATGATCCTGATGCTCAAGTACAGGATTGCTACATAGCTATGGAAGCTCTGTCCGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAGTCCTAAAGTCAAACCGAAAAGAGTTCTTTCACAAGGTTCAAGAAATCTTTGACAAGTTGTCTGGTCCAGTTGTGTTGATCTGTGGACAAAACAAAATTCAATCAGGATCAAAAGAGAAAAAGCAATTTGAGGAGGATCAGCTTGGAACTTTTAAAAAACAACTTGAGGAAGACAGGAAATTTGTGATTTCACGTAGTAGTTTGAATGAACTGCATACGGTATGGTTCCACTTAATGCACTTGGTATCATCAATATCAGACAATAATAGTTGGATTTTCATGTTGCAGTTCTCTCTAGAACCTGATTCCCTTTGGGATACTGTGATCAAGAAAGCTGAAAAGGTGGTGGGCTGGGCAAAGAATAATTACTTGTCATCTTGCCCACTTCCTTATGTTAAAGGAGAACGGTTGTGCCTGCCTCGTGAAAGCCTTGAAATTGCAATCTCAAGATTGAGGGATCAAGAAACTATGTCACGGAGGCCCTCTCAGGGTCTGAAGGCATGTGATTTATGCTACTTGTTGAAATTTCTCAACAACTTCATTTCAGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGAGGACGTAGGTGCTCTTGAAGATGTGAAGAAGGCGCTTAATGAACTTGTCATCCTTCCGATGAGAAGGCCTGAGCTTTTCTCTCATGGAAACTTGTTACGGCCTTGTAAAGGGATATTACTTTTTGGTCCTCCTGGCACTGGGAAAACTCTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGCTTCAACTCTAACATCAAAGAACCTCTGCATTGCTGCGGCATATAGGCCTGTTCAAGAGCTCCTAGAGAATGAAAAGAAGTCGAGCTACAGTGATCCAACACCGGCATTAAGACCTCTAAAAGTGGATGATTTTATTCAGGCAAAATCTAAGGTTGAAACCACAACTTATGTTTTGCCTTTGAAGAAGCATTGA 1455 0.411 MCDPRSIGSDSQQVATMLFIKKDVVVNIEDIASHASLLKRFSMMYLSFSPLITSEVRDESRLRSLSNGQRGEVYGVEGDQVAVIMDITEENKKEGEVEKSNEHTESRLCWIHVKDIEHDPDAQVQDCYIAMEALSEVLDSKQPLIVYFPDSTQWFHKSVLKSNRKEFFHKVQEIFDKLSGPVVLICGQNKIQSGSKEKKQFEEDQLGTFKKQLEEDRKFVISRSSLNELHTVWFHLMHLVSSISDNNSWIFMLQFSLEPDSLWDTVIKKAEKVVGWAKNNYLSSCPLPYVKGERLCLPRESLEIAISRLRDQETMSRRPSQGLKACDLCYLLKFLNNFISAVVPPGEIGVKFEDVGALEDVKKALNELVILPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITASTLTSKNLCIAAAYRPVQELLENEKKSSYSDPTPALRPLKVDDFIQAKSKVETTTYVLPLKKH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1445 484 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 427 472 - -
Lele53g1445 484 CDD AAA 389 451 - -
Lele53g1445 484 Pfam ATPase family associated with various cellular activities (AAA) 391 449 IPR003959 GO:0005524|GO:0016887
Lele53g1445 484 Gene3D - 349 427 IPR027417 -
Lele53g1445 484 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1445 Lele-ChrLele53 22297221 22305188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1445 385 465 Calmodulin-binding Proteins AT3G56690 38.272 2.65e-08 54.7