Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele53g1427 | ATGTCTTCCTCCGGTGGAATCGATCATGATGGCGGAACAAAACCTTTTTTCTGCTACAAATGCGATCGCCGAGTCAATATTCCCGCCTCCGATTCTTCCGACCCTTTCTGTCCATTCTGCTTTCAAGGCTTTCTCGAAGAAGTCGAAAACCCTAACCCTAACCCTAACCCTTTTGCAGACCCAGAGCCCTCTTTTGGCTTTGATCCTCTATCCTTCCTTCCCCTTCTCTTGTCCACTGCTTCTCGCTCCAGGATTCGACCAGATTCCGTTGATGCTGACATATTCGACCCTGTTCATTTCCTCCAGAACCACCTTCGAGATCTTCAGGCTGATGGCGCGAACGTCCAATTCGAGATCAATCATCCTCATGAACAAGCGTTTCGGCTACCCACGAACATTGGCGATTACTTTCTTGGTCCTGGCCTGGAGCAATTGATACAGCAGCTCGCGGAGAACGACCCAAACCGTTATGGCACCCCGCCTGCCTCCAAATCTGCTGTCCAGAACCTTCCAACTGTTACTGTCACCGATGAATTGTTGAACTCGGAATTGAACCAGTGTGCGGTATGTCAGGATGAGTTCGAGAAGGGTACCCAGGTAAAGCAAATGCCTTGCAAGCATGTGTATCATGATGATTGCCTGCTTCCTTGGCTCGAACTGCATAACTCTTGCCCGGTATGTCGATATGAGTTGCCCACTGATGACCCTGATTATGAGAACCCAGCCCACCGGGCCCATGGGAATGCTAATGCGGGGTGGAGGCCTGTTGGCAATGCCAGCAGCAGCGGAGGGGCTAACAGAGCCGTTCAGAGGACTTTTAGGATATCGTTGCGATATCCATTTGGTTCACGCGAGTCTACTCAAGAGAGTAGCGAACGAGGGTGGGGAAATATGCAAGAAGATTTGGATTGA | 912 | 0.5055 | MSSSGGIDHDGGTKPFFCYKCDRRVNIPASDSSDPFCPFCFQGFLEEVENPNPNPNPFADPEPSFGFDPLSFLPLLLSTASRSRIRPDSVDADIFDPVHFLQNHLRDLQADGANVQFEINHPHEQAFRLPTNIGDYFLGPGLEQLIQQLAENDPNRYGTPPASKSAVQNLPTVTVTDELLNSELNQCAVCQDEFEKGTQVKQMPCKHVYHDDCLLPWLELHNSCPVCRYELPTDDPDYENPAHRAHGNANAGWRPVGNASSSGGANRAVQRTFRISLRYPFGSRESTQESSERGWGNMQEDLD | 303 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele53g1427 | 303 | ProSiteProfiles | Zinc finger RING-type profile. | 187 | 228 | IPR001841 | - | |
Lele53g1427 | 303 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 149 | 234 | IPR013083 | - | |
Lele53g1427 | 303 | MobiDBLite | consensus disorder prediction | 244 | 267 | - | - | |
Lele53g1427 | 303 | Pfam | Ring finger domain | 185 | 228 | IPR001841 | - | |
Lele53g1427 | 303 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 96 | 232 | - | - | |
Lele53g1427 | 303 | SMART | ring_2 | 187 | 227 | IPR001841 | - | |
Lele53g1427 | 303 | MobiDBLite | consensus disorder prediction | 281 | 295 | - | - | |
Lele53g1427 | 303 | SUPERFAMILY | RING/U-box | 166 | 237 | - | - | |
Lele53g1427 | 303 | CDD | RING-H2_RNF126_like | 186 | 228 | - | - | |
Lele53g1427 | 303 | MobiDBLite | consensus disorder prediction | 280 | 303 | - | - | |
Lele53g1427 | 303 | Pfam | zinc-ribbon | 16 | 47 | IPR039525 | GO:0061630 | |
Lele53g1427 | 303 | FunFam | E3 ubiquitin-protein ligase RING1-like | 148 | 234 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele53g1427 | Lele-ChrLele53 | 22189144 | 22190055 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele53g1427 | 131 | 239 | C3H Transcription Factor Family | AT5G01980 | 50.459 | 3.16e-33 | 125 |