Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1423 ATGTCTCAGACATCTGGGCTACTCCCTGCTTTCCAGTCTCTCGAACCAGTGCAACCTAATGTCAAGTTCGCGGCTGATCCAACACTTGTTTTTGTGGAAAAACATGAAAACGGTGCACAAGGAAGGGAGGCATCTGAGGAAGTTCAAGACCTTGCTGGTGATATGGATCTTCTTGACGAGGATTCGCCATATGGTGAAAGAACTGCATCATTAGAAAGCAGGCCATCAGCTGGTGATGATGGCACAGAATCTGCTCCTCAGCCACTCCCCTCAATCTCCCCAACGTCCAGTGACCACCGGTGGAGTGATACAACACCTTATGCTTCAAAGAAGGTACTTTTGGCTCTTGATTCCAATTTCACTCTCCTTGTTTTGAAATCGGTTAATCACAATGAAGGGAATCAATCTATAATTATAAGTGGTGAAAGTGGAGCAGGAAAGACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCCGCCCTTGGAGGTGGAAGTGGAATAGAGGGAAACTTATTGAGATTAACTTCAGTGAAACTGGAAAAATATCGGGTGCTAATATTCAAACATGTGAGTTTACTGCCGCATTTGTGGTTGACACTATCTCTGACTCCGTTTGAAGGTTCTAACCATTATGTTTCTATTCACATGTCGAATCTATGTTGTGTTCCCTGCATAACCCTAAACAGTTTTGCTAGAAAAGGTTTGTTCAACGTTGCTAAATTGATTGGCTGTGACATTGGAGATCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAACGACAACATTGTCCAGAAGTTAACGCTGTCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCTGTATATGCATGTCTATTTGATTGGCTGGTTGAACAAATAAACAATTCACTTGCTGTTGGTAAAAAACGCACTGGTAGATCAATCAGTATTTTAGACATCTATGGGTTTGAATCTTTTGAGAAGCCACTGGGGTTACTATCCCTTTTAGATGAGGAGTCCACTTTCCCAAATGGTACAGATTTGACATTTGCTAACAAGCTTAGACAGCATCTGAATTCAAATTCATGTTTCCAAGGAGAACGAGGCAATGCCTTTGCTGTGAGTCATTATGCAGGGGAGGTCACCTATGATACATCTGGATTTTTGGAGAAGAACAGGGACCTATTACACTCTGATTCCATTCAACTTTTATCCTCATGTACATGCCATCTTCCTCAGCAATTTGCAGCCAATATGCTTTTGCAGTCCGAGAAGCCTGTAGTTGGTCCCTTACACAAGTCAGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGTCAGCTGTTTCAACTGATGCAACGTTTGGAGAGCACCACACCGCATTTTATTCGATGCATTAAGCCTAATAACTTCCAGTCACCAGGATCATATGAGCAAGGGCTTGTACTTCAGCAACTGAGATGTTGTGGAGTACTGGAAGTGGTTCGGATATCAAGATCAGGTTTTCCTACTAGAATGTCTCATCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTTGAAAATTTTGCATCTCAGGATCCACTCAGTGTTTCAGTTGCAATTCTACATCAGTTTAGTATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGACAGATTGGAGTGCTGGAAGATACTAGAAATCGTACCCTCCATGGCATCTTACGTGTCCAAAGTTGCTTCAGGGGTCACCGAGCACGTTGTTACTACAAGGAGCTTAAGAGAGGAATCACTACACTCCAGTCATGTACTTCATTTTTCTCCTCACGATTCTTTCTGTTTTTCATTCTCTGGGAGGGAGTAGTATATTTTCTTACCTCTATTCATGCAGTTGTTAGGGCAGAGAAAACAAGAAAGGAATATGCAGATTCACTTCGGCGACATAGAGCTGCGGTTCTTATACAGAAGCATATGAAAACAGTATTTGCGAGAAACAGAATGAAGAATATCTGCGACGCTTCGATAGTCATTCAATCAGCTATCCGTGGTTCGTTGGCCAGAAGATGCTCAGGAGATATGGGATTGTTGAAATCGATAGGGATGAAGACGAATGAGTCAGACGAAGTACTAGTCAAGTCTTGTTTCCTGACCGACTTACAGCGTCGGGTACTCAAGGCTGAAGCTGCTCTGAGAGTGAAAAAAGAGGAAAATGACATTCTTAACCAGCGTCTCCAACAGTATGAGAGCCGTTGGTCTGAGTATGAATCCAAGATGAAATCAATGGAAGAAGGGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAAAAGAGCTTAGCAATCGATGATTCTGCAAGAAATTCGGATGCTTCTGTGAATGCAAGTGATGATAGAGATTACAGTTCAGATATAGGAAGCCACCATAGGCGCCAAGAAAGCAGCTCAAGTGTAGGAAATTATCACAGACGCCAAGAAAGCAATGGGTTTAGATCAACGGGTGCAGGTTTGAACGTCATAAGTGGGTTGGCTCATGAATTGGAGCAGAGGCGTCAAGTTTTTGGCGACGATGCCAAGTTCTTGGTTGAGGTGAAATCTGGTCAAGTTGAAGCAAGTTTGAATCCAGAACAGGAGCTTAGAAGGTTGAAACACACGTTTGAAGCTTGGAAGAAAGATTATGCGGCAAGACTGCGTGAGACAAAGGCAATTTTACACAAGCTTGGAAGTGAAGAAGGTGGAATTGACAAAGTGAAAAAAAGTTGGTGGGGAAGAAGGAACAGTACGAGGTTTAGTTGA 2808 0.4256 MSQTSGLLPAFQSLEPVQPNVKFAADPTLVFVEKHENGAQGREASEEVQDLAGDMDLLDEDSPYGERTASLESRPSAGDDGTESAPQPLPSISPTSSDHRWSDTTPYASKKVLLALDSNFTLLVLKSVNHNEGNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEGNLLRLTSVKLEKYRVLIFKHVSLLPHLWLTLSLTPFEGSNHYVSIHMSNLCCVPCITLNSFARKGLFNVAKLIGCDIGDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSVYACLFDWLVEQINNSLAVGKKRTGRSISILDIYGFESFEKPLGLLSLLDEESTFPNGTDLTFANKLRQHLNSNSCFQGERGNAFAVSHYAGEVTYDTSGFLEKNRDLLHSDSIQLLSSCTCHLPQQFAANMLLQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNFQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENFASQDPLSVSVAILHQFSILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHRARCYYKELKRGITTLQSCTSFFSSRFFLFFILWEGVVYFLTSIHAVVRAEKTRKEYADSLRRHRAAVLIQKHMKTVFARNRMKNICDASIVIQSAIRGSLARRCSGDMGLLKSIGMKTNESDEVLVKSCFLTDLQRRVLKAEAALRVKKEENDILNQRLQQYESRWSEYESKMKSMEEGWQKQMRSLQSSLSIAKKSLAIDDSARNSDASVNASDDRDYSSDIGSHHRRQESSSSVGNYHRRQESNGFRSTGAGLNVISGLAHELEQRRQVFGDDAKFLVEVKSGQVEASLNPEQELRRLKHTFEAWKKDYAARLRETKAILHKLGSEEGGIDKVKKSWWGRRNSTRFS 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1423 935 MobiDBLite consensus disorder prediction 34 103 - -
Lele53g1423 935 SMART MYSc_2a 93 570 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele53g1423 935 Pfam IQ calmodulin-binding motif 674 689 IPR000048 GO:0005515
Lele53g1423 935 Pfam IQ calmodulin-binding motif 575 592 IPR000048 GO:0005515
Lele53g1423 935 ProSiteProfiles IQ motif profile. 673 699 IPR000048 GO:0005515
Lele53g1423 935 Gene3D - 645 692 - -
Lele53g1423 935 Gene3D - 324 459 - -
Lele53g1423 935 Gene3D Kinesin motor domain 460 498 IPR036961 -
Lele53g1423 935 Gene3D Kinesin motor domain 306 320 IPR036961 -
Lele53g1423 935 PANTHER MYOSIN 130 173 - -
Lele53g1423 935 MobiDBLite consensus disorder prediction 86 103 - -
Lele53g1423 935 Coils Coil 717 765 - -
Lele53g1423 935 ProSiteProfiles IQ motif profile. 573 600 IPR000048 GO:0005515
Lele53g1423 935 SMART iq_5 670 692 IPR000048 GO:0005515
Lele53g1423 935 SMART iq_5 647 669 IPR000048 GO:0005515
Lele53g1423 935 SMART iq_5 570 592 IPR000048 GO:0005515
Lele53g1423 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 605 IPR027417 -
Lele53g1423 935 Gene3D Kinesin motor domain 122 178 IPR036961 -
Lele53g1423 935 MobiDBLite consensus disorder prediction 790 804 - -
Lele53g1423 935 MobiDBLite consensus disorder prediction 790 836 - -
Lele53g1423 935 MobiDBLite consensus disorder prediction 822 836 - -
Lele53g1423 935 MobiDBLite consensus disorder prediction 805 821 - -
Lele53g1423 935 Gene3D Myosin VI head, motor domain, U50 subdomain 235 305 - -
Lele53g1423 935 Gene3D Myosin VI head, motor domain, U50 subdomain 392 437 - -
Lele53g1423 935 ProSiteProfiles Myosin motor domain profile. 1 569 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele53g1423 935 Gene3D - 502 611 - -
Lele53g1423 935 Pfam Myosin head (motor domain) 325 557 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele53g1423 935 Pfam Myosin head (motor domain) 126 163 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1423 Lele-ChrLele53 22155518 22166995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1423 235 934 Myosins gene family AT1G50360 68.074 0.0 1000