Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1412 ATGTCGCCGAAACGTGCTTCTCCTTTGGACGAACCACCCTCAGCTTCTTCTTCATCCGAAGAAGAAGAGGAAGCTTCATCCGAAGTAGGTTCTTCATCTGAAGAGGAGGACGATCAACCTGCAAAGCCCCCACAACCACTCTCTACCGAGAAGAAGCATGCTGCCAAAAAGCCACCACCTGCTGCTCCGGTCACAAAATCTCAACCTAAAGCTTCGGTGTCGAAATCTGAGACAGAATCTGATGCCGGATCTGATTCCGATGATGAGCGCCCCAGTGAGAAGACGGATCTGATTGTCAAGCCCATTGCCTCCAAGCCTAAAGAAGAGACGCCCAAAGCAAAGAAGTGGAAGTCTCAGCCATCCGTTACGCCGGCCAAAGCAGCGAACAAGCGACCGAGTGACAACAGCCGGCCGGTCAGTGACTCGAAGAAGGCGAAGAAGGGGAAGGATGCTGTCGGAAAAGATGAGATCCCGGTGGCAGAGGATGACAGTAAAAAAACTGGGGATGAGTCCAAGAAGCTTTTTCAGAGACTGTGGAGTGAGGATGATGAGATTGCTATCCTCACAGGTTTAGCGGAATATGCAGCGAAGACCGGAGAAGCCCCGATTAAGGATATTAATGGATTTCATGATTTCATAAAGAAGTCGGTCCATGTGGATGTTTCAAATGAACAATTGGCGAATAAGATTCGGACTTTGAAGAGAAAGTACGTGAAGAATGCTCAAAGAGGGAAAAATGGCGAATGCCCTAGTTTTTCGAAACCATACGATAAGAAAGTCTTTGAATTGTCAAAGAAGATCTGGGCTGATGAAGGAGTCAATGGAGGAATGGACCTTACAAAGTCCAATGGGAAAGTGAAGAAAAAAATGAAGGAAGGTAGCGGTGTCGTGGCTTTTCAGAAACCAGTGGCTGATCTGGTTTCAAATTCGAAGGAAGCTAGAAAGGTTTACGTTGATCCGAATGCAGGTTCGCTGCTCAGTTTAAGTGAAATGATTAGGTTCAACAAAAGTCTGGGTCTGTCAAGGTTGGATGATGATGCTATTAAGAGGGGATATGAATTGATTGGAGCATCCAAGAAGGCAGAGTTGGAGGACAGGTGGAAGACTCTGCAAATTGCAGAGTTGGAGCTGTTTGTGAAACGAGTCGAGCTTGTCAAGGATGAGGCTAGTTTGATATGGGAGGCAACCAAATCTTCAGGCAATTAG 1206 0.4677 MSPKRASPLDEPPSASSSSEEEEEASSEVGSSSEEEDDQPAKPPQPLSTEKKHAAKKPPPAAPVTKSQPKASVSKSETESDAGSDSDDERPSEKTDLIVKPIASKPKEETPKAKKWKSQPSVTPAKAANKRPSDNSRPVSDSKKAKKGKDAVGKDEIPVAEDDSKKTGDESKKLFQRLWSEDDEIAILTGLAEYAAKTGEAPIKDINGFHDFIKKSVHVDVSNEQLANKIRTLKRKYVKNAQRGKNGECPSFSKPYDKKVFELSKKIWADEGVNGGMDLTKSNGKVKKKMKEGSGVVAFQKPVADLVSNSKEARKVYVDPNAGSLLSLSEMIRFNKSLGLSRLDDDAIKRGYELIGASKKAELEDRWKTLQIAELELFVKRVELVKDEASLIWEATKSSGN 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1412 401 PANTHER BNAANNG10740D PROTEIN-RELATED 12 390 IPR007592 GO:0006355
Lele53g1412 401 Coils Coil 223 243 - -
Lele53g1412 401 MobiDBLite consensus disorder prediction 16 34 - -
Lele53g1412 401 MobiDBLite consensus disorder prediction 1 171 - -
Lele53g1412 401 MobiDBLite consensus disorder prediction 136 171 - -
Lele53g1412 401 MobiDBLite consensus disorder prediction 85 115 - -
Lele53g1412 401 Pfam Protein of unknown function, DUF573 175 268 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1412 Lele-ChrLele53 22108584 22109789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1412 4 398 GeBP Transcription Factor Family AT1G61730 32.331 2.38e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lele53g1412 DUF573 4.6e-33 CL0123