Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1390 ATGGGGGTTTTCGATCTGTACGCGCCGCTTTTCTTTTGTTTCTTGTCTGTTTGGCTGCTAGGAAAATGTAGGAATCATGACGATTTTCAGATCGTGAACTTTCCGCTCTTTGTTCTCATGGACGATGATGCGTTGAACATGCGCAATTGGGGTTACTATGAACCCTTCAAAGGGGGGCATCTAGGCCTTCAGCTCATGTCTAGTATGACAGAACGAGACACCAAGCCATTTATGCCAGGCCGTGATCCTCCTATGTTAGTTAGTCCAAATGGAAGCTTCCACCCCCGGGATTGTGTTGTTTCAGAAGCCTCAATTCCAATTAACTACGTTAGGGACAGTTGGATCAGCCAGAGAGACAGGTTTCTCAATATGTTGCCCACAAATCCTAATTATGCCGTTCTTCCAGAAACATCAGGAGCGCCTTCCTTGCAAATCATACAGCCACCTGAAACATCGAGAGATGATAGGGTGAATCAAGTTGAAGACCCTCCTGTTAAAAAGGAAGTTGGCCAATTGAAGAAAAGGCGGAGTGGGGGTGCTCCAAAGACTCCAAAAGCCAAAAAACCAAGGAAGCCAAAGGATAATAGCAATGCTTTGGTTCAACGTGAGAAGCCAGCAAGGAAGGCTATGGAGGTTGTGATAAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCTGTTTGCTCGTGTACTGGGGCGCCTCAGCAGTGTTATCGATGGGGCTGTGGTGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCAATGTATCCATTGCCAATGAGCACCAAAAGGCGTGGTGCAAGGATAGCTGGACGGAAAATGAGTCAAGGTGCTTTTAAGAAGGTTTTGGAAAAACTTGCAGCCGAAGGATATAATTTTGCTAATCCTATTGATCTGAGGACTCACTGGGCTAGGCATGGCACCAACAAGTTCGTCACTATCAGGTAA 954 0.4591 MGVFDLYAPLFFCFLSVWLLGKCRNHDDFQIVNFPLFVLMDDDALNMRNWGYYEPFKGGHLGLQLMSSMTERDTKPFMPGRDPPMLVSPNGSFHPRDCVVSEASIPINYVRDSWISQRDRFLNMLPTNPNYAVLPETSGAPSLQIIQPPETSRDDRVNQVEDPPVKKEVGQLKKRRSGGAPKTPKAKKPRKPKDNSNALVQREKPARKAMEVVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1390 317 Pfam GAGA binding protein-like family 40 317 IPR010409 -
Lele53g1390 317 SMART GAGA_bind_2 40 317 IPR010409 -
Lele53g1390 317 MobiDBLite consensus disorder prediction 133 203 - -
Lele53g1390 317 PANTHER - 40 317 IPR010409 -
Lele53g1390 317 MobiDBLite consensus disorder prediction 133 153 - -
Lele53g1390 317 MobiDBLite consensus disorder prediction 154 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1390 Lele-ChrLele53 21999610 22000892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1390 40 317 BBR or BPC Transcription factor family AT2G01930 58.249 1.30e-108 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Lele53g1390 GAGA_bind 3.9e-111 No_clan