Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1382 ATGGTCACTGCCTCCTACACTCCTGCAGAAAAGTTTTCCATTAACTGTGGCTCCTCCGGCAATTCATACACTACTTCCGATAACAGAATATGGGAACCAGATGACGCTTCCAAACTACTTTCCCTTTCTCAAAGCAGCCACACCTCCATCGCTTCCGATGCAGTTCAGGTTTCTCCTCCATTGGAGAAAGTTCCTTATGCCACCGCTCGCCTGTCTCATTCTGAATTCATCTACTCCTTTAAGGTCTCCGAAGGCCAAAAGTTTGTTCGCCTCTTCTTTTTCCCAGCCACACATGCCAAGTTCGATCGTTCCAATGCTCTCTTCTCTGTTAAAGCAGGCTACCACACGCTCCTCAAGGACTTCAACGCTTCACTCACCGCTGATAACGATGATGATCCCGAGGAAAAAGTGTTCAGAGAGTACTGTGTTAACGTGGAACCCGGTCACAGGCTGAACATCACTTTCACTCCCAGCACCAATCATCCAGACGCCTACGCGTTTATCAATGGGATTGAGGTTGTGGCCATGCCCACCGATCTTTATTACAAAAAAGCTGATGACCCAGCGTTGAAGCTAGTTGGCAAGAGTAATGGGATTCAAGTTGATAACAACACTGCTCTTGAGACGGTATACAGAATCAATGTTGGAGACAGTGAGATTCCTGCTAACGAAGACACTGATGGTATGCTTCGCCACTGGTATGACGTAACTGGATATGGCTATGAGGTGATGCAAACCTTGCGAGACCTAAAAGATGATTCTGGTGCGAGGCTGATATACCCAAATGAAACTCTCAAAGAAGCAGCACCTGAGGATGTCTATTTAACTGCGAAGACCTCTGAAGATACAATGACTTGGGAGATTAAAGTGGATTCCATGTTTGCTTATATGATCAGACTACACTTCTGTGAGTTGGAAGAGCAAGTCCAGAAGGGAGAAAGAGTTTTTCAGATACTCATAGCTGACACTTTGGCTGAGCCTCAGTTCGATGTGCTTGGTTCGCAGGAAGATAGCCGAGTTTCTCTTTATGAGGACTATGCTGTTTCGTTGAAGCAAGGAAGCTTGATGAATAGGCAGGAACTTTCAATCAAGTTGCAGAAACTCCCAGAAAGCAAGTACGGTGTCCTATTGAATGGAATTGAAATTTTCAAGATCAGTGATCCTAGTGACAATCTTGGAGGACCCAACCCAGACCCAACCTCTTCACCGACCAAACCATCAAAAATCTCCAAGAAAGATTCAAAAACTCCCATGGTGATTGCCATTGCGTGTGCAGCTTTAGGTGTAATTATTGTACTATCTGTCATCTGTTGTTTCTTCATATTTCGGCCAAGGACAAGAGGTTCAGGGAAGAAATCATTAGATTTGTGCCGTAACTTTTCCATCGCAGAGATCAGAGCCGCCGCCAGAGACTTTGAAAAAGGTTCAATCATTGGTCATGGGGGATTTGGTGTGGTCTATAAAGGACACATTAACAAGGGGAAGACATCAACCCCCGTAGCCATCAAACGGCTCAAACCAGATTCGCAACAAGGGGTGGGTGAGTTCCAGACAGAGATCAAGATGCTGTCCCAGTTTCGCCATCGTCACTTGGTTGACCTCATTGGCTACTGCAATGATGACAAGGAGATGATCCTGTGTCTGAATAAGTTTGTTCAAACAGCATTGGCTTGTCTGCGTGATAATGGTAAGCTTCGGCCGACGATGATAGATGTTGTGAGGGAGTTAGAGACTGTGTTGAGGATGCAGGGAAGCATGGAGGTTGAGATTCCGAGAGATAATGGTGGAAAGTCCAAGGGCAGCAGTAAGGTCACCGTCTCAAGTAGTGAAGAGGAGCAAGCTCTGGTTCCTGCAGGGGTGTTCTCTGAGCTTGCACATCCAACAGCACGTTAA 1893 0.4606 MVTASYTPAEKFSINCGSSGNSYTTSDNRIWEPDDASKLLSLSQSSHTSIASDAVQVSPPLEKVPYATARLSHSEFIYSFKVSEGQKFVRLFFFPATHAKFDRSNALFSVKAGYHTLLKDFNASLTADNDDDPEEKVFREYCVNVEPGHRLNITFTPSTNHPDAYAFINGIEVVAMPTDLYYKKADDPALKLVGKSNGIQVDNNTALETVYRINVGDSEIPANEDTDGMLRHWYDVTGYGYEVMQTLRDLKDDSGARLIYPNETLKEAAPEDVYLTAKTSEDTMTWEIKVDSMFAYMIRLHFCELEEQVQKGERVFQILIADTLAEPQFDVLGSQEDSRVSLYEDYAVSLKQGSLMNRQELSIKLQKLPESKYGVLLNGIEIFKISDPSDNLGGPNPDPTSSPTKPSKISKKDSKTPMVIAIACAALGVIIVLSVICCFFIFRPRTRGSGKKSLDLCRNFSIAEIRAAARDFEKGSIIGHGGFGVVYKGHINKGKTSTPVAIKRLKPDSQQGVGEFQTEIKMLSQFRHRHLVDLIGYCNDDKEMILCLNKFVQTALACLRDNGKLRPTMIDVVRELETVLRMQGSMEVEIPRDNGGKSKGSSKVTVSSSEEEQALVPAGVFSELAHPTAR 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1382 630 Pfam Malectin-like domain 14 385 IPR024788 -
Lele53g1382 630 SUPERFAMILY Protein kinase-like (PK-like) 463 548 IPR011009 -
Lele53g1382 630 Gene3D Phosphorylase Kinase; domain 1 445 549 - -
Lele53g1382 630 MobiDBLite consensus disorder prediction 598 612 - -
Lele53g1382 630 Gene3D - 11 177 - -
Lele53g1382 630 Gene3D - 205 386 - -
Lele53g1382 630 MobiDBLite consensus disorder prediction 388 411 - -
Lele53g1382 630 ProSitePatterns Protein kinases ATP-binding region signature. 478 503 IPR017441 GO:0005524
Lele53g1382 630 MobiDBLite consensus disorder prediction 393 407 - -
Lele53g1382 630 MobiDBLite consensus disorder prediction 589 612 - -
Lele53g1382 630 ProSiteProfiles Protein kinase domain profile. 472 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1382 630 FunFam FERONIA receptor-like kinase 11 177 - -
Lele53g1382 630 Pfam Protein tyrosine and serine/threonine kinase 474 549 IPR001245 GO:0004672|GO:0006468
Lele53g1382 630 PANTHER OS03G0124300 PROTEIN-RELATED 4 449 - -
Lele53g1382 630 FunFam receptor-like protein kinase FERONIA 443 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1382 Lele-ChrLele53 21960912 21963419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1382 547 630 Receptor kinase-like Gene Family AT3G51550 31.356 4.72e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele53g1382 Malectin_like 2.3e-39 CL0202