Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1357 ATGGTTTCAAGATCTTACTCAAATCTATTGGACCTAGCCTCTGGCGACTCTCCATCATTTGGGTTTATAAACCGTGGGATTCCCAAGATTATGACAGTGGCTGGTTTGATTTCTGAGGTTGATGACGACCCAGAGGAGAGTGTGTACTCTGATCCCTCGTCGTCGTCGGTTCACCGTGAACGGATCATAATAGTGGCGAACCAGCTTCCAATCAGGGCTCAGAGGAAGACCGATGGTACTAGTAGTAGTAGTGGAACTAGGAATTGGTTGTTCCAGTGGGATGATAATTCACTTCTTCTTCAGTTGAAAGATGGATTAGGTGATGATGATATTGAGTTTATTTATGTTGGGTGTCTTAAGGAAGAAATCCACCCAAATGAACAAGATGAGGTCTCACAATTCCTCCTTGAAAATTACAGATGTGTCCCTACTTTTCTCCCTTCTGATCTGTTTTCAAGATACTATCATGGGTTTTGCAAGCAGCAGCTATGGCCTTTGTTTCACTACATGCTTCCTCTGTCACCAGAACTTGGTGGTAGATTCAATAGGTCACTCTGGCAGGCTTATGTCTCTGTGAATAAGATTTTTGCTGATCGAATTATGGAAGTGATTAACCCAGAAGACGATTTTGTTTGGATCCATGATTATCATCTCATGGTGTTGCCTACATTCTTGAGGAAGAGATTTAACAGAGTGAAACTTGGGTTCTTCCTCCATAGCCCGTTCCCTTCTTCAGAAATTTACAAGACATTGCCCATTAGAGAAGAACTACTGAGAGCTCTTCTGAATTCAGATTTGATAGGGTTCCACACATTTGATTATGCACGGCACTTCCTCTCCTGTTGTAGCCGGATGCTTGGCCTTAGCTACGAATCGAAGCGGGGTTATATCGGGCTCGAGTATTATGGTAGGACTGTTAGTATCAAAATTCTTCCCGTTGGTATCCACATGGGTCAGCTTCAACAAGTGTTAAGCCTTACTAAGACAGAAGAGAAAGTTGCTGAGCTCATTCAGCAATTTTCAGGTCGAGGAAGGACATTGATGCTTGGAGTTGATGACATGGATATCTTTAAGGGAATAAGTTTGAAGCTTTTGGCAATGGAACAGCTTCTCATTCAACATCTAGAGTGGCAAGGAAAGGTTGTATTGGTCCAAATCGCTAACCCGGCCCGGGGGAAAGGGAAAGATGTGAAGGAAGTGCAAGCGGAGACAAAGGCAACAGTTAAAAGGATTAATGAAAAATTTGGGAAACCTGGGTATGATCCTGTCATTCTGATTGAGGAGCCACTCAAGTTCTATGAGAAAGTTGCATACTATACTGTTGCAGAGTGTTGTCTAGTCACTGCAGTTAGGGACGGAATGAATCTCATACCGTATGAATACATAATCAGTCGTCAAGGAAACGAAAAATTGGACAAAGTTTTGGGACTGTCTTCCTCTCCTAAGAAGAGCATGTTGGTTGTCTCTGAGTTCATAGGTTGTTCCCCATCTTTGAGTGGAGCAATCAGAGTGAACCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCTGCCCTGGAAATGGCTGATTCAGAGAAACAACTTAGGCATGAGAAGCATTATAGATATGTTAGTACCCATGATGTTGGGTACTGGGCTCGAAGCTTCTTGCAGGATTTGGAAAGGACTTGTAGTGATCATGTCCGGCGAAGGTGGTGGGGAATCGGATTTGGATTGGGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCAGCCTACAAGCGAACTAAAACTCGGGTGATCCTTCTAGATTATGATGGCACACTAATGCCTCAAGCCTCCATTGATAAGAGTCCGACGAGTAAAACTATTGAAATTCTTAGCCGCTTGTGTAGAGACAAGAACAACATGGTGTTTCTCGTTAGTGCTAGAAGCCGAAAAACGCTTGCTGAATGGTTTTCTCCTTGTGAGAACCTGGGAATTGCAGCTGAGCATGGCTACTTTCTAAGATTGAAGCGTGATGCAGAATGGGAAACATGTGGACCTGCAACAGACTGTAGCTGGAAACAGATTGCTGAGCCTGTGATGAAGCTTTATACTGAAACAACTGATGGATCCACTATTGAAGATAAAGAGACTGCACTTGTGTGGTGCTATGAGGATGCAGATCCAGATTTCGGGTCATGCCAAGCCAAGGAACTTCTTGATCATCTTGAAAGTGTGCTTGCAAATGAACCTGTCACTGTCAAGAGTGGCCAGAACATTGTAGAGGTTAAACCACAGGGAGTAAGCAAAGGGATTGTGGTCAAGCGCTTGCTTTCAACCATGCAAGAAAATGAAATATCACCGGATTTTGTGTTGTGCATAGGAGATGATAGGTCTGATGAAGACATGTTTGAGGTAATCTCCAATTCCATAGCTGGTCCCACACTTGCACCAAGGGCCGAGGTATTTGCGTGCACGGTTGGCCGGAAGCCTAGCAAAGCCAAGTATTATTTGGATGATACAGCTGAAATAGTGAGATTGATGCAGGGACTGGCCTGCGTTTCAGAACCTAGTTTAGGCATGGAAGAAAGAGATGATGGTGAATGA 2601 0.4371 MVSRSYSNLLDLASGDSPSFGFINRGIPKIMTVAGLISEVDDDPEESVYSDPSSSSVHRERIIIVANQLPIRAQRKTDGTSSSSGTRNWLFQWDDNSLLLQLKDGLGDDDIEFIYVGCLKEEIHPNEQDEVSQFLLENYRCVPTFLPSDLFSRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQQVLSLTKTEEKVAELIQQFSGRGRTLMLGVDDMDIFKGISLKLLAMEQLLIQHLEWQGKVVLVQIANPARGKGKDVKEVQAETKATVKRINEKFGKPGYDPVILIEEPLKFYEKVAYYTVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLSSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLGFRVVALDPNFRKLSMEHIVSAYKRTKTRVILLDYDGTLMPQASIDKSPTSKTIEILSRLCRDKNNMVFLVSARSRKTLAEWFSPCENLGIAAEHGYFLRLKRDAEWETCGPATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGIVVKRLLSTMQENEISPDFVLCIGDDRSDEDMFEVISNSIAGPTLAPRAEVFACTVGRKPSKAKYYLDDTAEIVRLMQGLACVSEPSLGMEERDDGE 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1357 866 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 850 IPR001830 GO:0003824|GO:0005992
Lele53g1357 866 Gene3D Glycogen Phosphorylase B; 53 322 - -
Lele53g1357 866 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 604 806 IPR006379 -
Lele53g1357 866 FunFam Trehalose-6-phosphate synthase 2 685 764 - -
Lele53g1357 866 Pfam Glycosyltransferase family 20 61 555 IPR001830 GO:0003824|GO:0005992
Lele53g1357 866 CDD HAD_TPP 603 844 - -
Lele53g1357 866 Pfam Trehalose-phosphatase 605 839 IPR003337 GO:0003824|GO:0005992
Lele53g1357 866 Gene3D Glycogen Phosphorylase B; 323 539 - -
Lele53g1357 866 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 558 - -
Lele53g1357 866 Gene3D - 601 733 IPR023214 -
Lele53g1357 866 Gene3D - 734 863 IPR023214 -
Lele53g1357 866 FunFam Alpha,alpha-trehalose-phosphate synthase 323 539 - -
Lele53g1357 866 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 731 862 - -
Lele53g1357 866 CDD GT20_TPS 61 555 IPR001830 GO:0003824|GO:0005992
Lele53g1357 866 SUPERFAMILY HAD-like 602 849 IPR036412 -
Lele53g1357 866 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 321 - -
Lele53g1357 866 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 601 718 - -
Lele53g1357 866 TIGRFAM T6PP: trehalose-phosphatase 600 849 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1357 Lele-ChrLele53 21750491 21753875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1357 1 854 Trehalose Biosynthesis Gene Families AT1G68020 80.626 0.0 1457