Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1331 ATGTCAATGTTCTCTTCTCTCGTTCCCCTTCTTCTTCCTCTTCTGCTACTCACTTCCTTCACTACCCAATCGTCTTCCTCCTCCACCGAGGCTTTCATCTTTGGCGGTTGCTCTCAGGCTAAGTTCACGTCGGGCTCTGCGTATGAGTCCGGCGTCAACTCCGTACTCACTTCCATCGTCAACGCCGCCATGTTCACCTCCTACAACAACTTCACCATCCCTCCCTCTTCCTCCTCCTCCTCACAGGACACCCCTATCTACGGCCTCTTCCAGTGCCGCGGCGACCTTGCCACCACCGACTGCTCCCGCTGCGTCACGCAGGCCGTCCCCCAGCTTGGCACCATCTGCCCCGACTCCGTCGGCGGAGCCTTGCAGCTCGACGGTTGTTTCGTTAAGTATGATGGTTCTAAGTTCTTGGGCGTGGAGGACAAGAGTTTGGTCCTCAAGAAATGTGGGCCGTCCATTGGGTTTACTTCCGACGTGTTGACCCGTAGAGATGCCGTGCTGGCGTATTTGGAGACGTCCGATGGGATGTACAAGACGTTTAGAACGACTAGCTCAGGGGATTTGCAGGGTATGGCGCAGTGCGTGGGGGATTTGAGTGCGACCGAGTGCCAGGATTGTCTCTCGAATGCGATCGGACGGCTAAGGGTAGAGTGTGGGCCCGCCCAGTGGGGACAGATATACTTGGCCAAGTGCTACGCGCGCTACTCCGAAGGTGGAGATTACTCGCCCAGCGGAAACGGTGAGCATAAAAACAAGAAGAATGACGATGAACTTCAGAAGACACTGGCAATAATAGTTGGACTCATAGCAGGGGTGGCTCTACTCATCATATTCATTTCATTCTTGACCAAGTTGTACAAAAAGGATAAAGGTGGCAAATGA 888 0.5405 MSMFSSLVPLLLPLLLLTSFTTQSSSSSTEAFIFGGCSQAKFTSGSAYESGVNSVLTSIVNAAMFTSYNNFTIPPSSSSSSQDTPIYGLFQCRGDLATTDCSRCVTQAVPQLGTICPDSVGGALQLDGCFVKYDGSKFLGVEDKSLVLKKCGPSIGFTSDVLTRRDAVLAYLETSDGMYKTFRTTSSGDLQGMAQCVGDLSATECQDCLSNAIGRLRVECGPAQWGQIYLAKCYARYSEGGDYSPSGNGEHKNKKNDDELQKTLAIIVGLIAGVALLIIFISFLTKLYKKDKGGK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1331 295 Pfam Salt stress response/antifungal 168 238 IPR002902 -
Lele53g1331 295 Pfam Salt stress response/antifungal 37 134 IPR002902 -
Lele53g1331 295 FunFam Cysteine-rich repeat secretory protein 60 159 240 - -
Lele53g1331 295 ProSiteProfiles Gnk2-homologous domain profile. 139 242 IPR002902 -
Lele53g1331 295 ProSiteProfiles Gnk2-homologous domain profile. 30 138 IPR002902 -
Lele53g1331 295 FunFam cysteine-rich repeat secretory protein 3 29 138 - -
Lele53g1331 295 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 3 287 - -
Lele53g1331 295 Gene3D - 156 240 IPR038408 -
Lele53g1331 295 Gene3D - 28 138 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1331 Lele-ChrLele53 21595792 21597600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1331 2 237 Pollen Coat Proteome AT4G20670 25.869 1.03e-15 73.6