Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1319 ATGACTACCCGACGCCTCCTCCTCCTCCTCCTCTTCTCTTCCACATTCTTCTTCCTCCACCCTTCCACCACCGCCGGCCACTCCTACTCCACCGCTCCTTCCCCCAACTCCTCCGATTTCATCCGCACCAGCTGCGGCGCCACTCTCTACCCTGACATCTGCTACACCTCCCTCTCTCGCTACTCCAATGCCGTCCAGCAGAATCCCGGCCAGCTCGCTCGCGTCGCCATCTCCGTCAGTCTCTCCAAGGCTCACCGTATGGCCTCCTACATCTCCAACCTCACTCGCGACGCAGACTACGAAGCCAACTCGCGCGCAGCCTCCGCCCTCCATGACTGCTTCAGCAACGTCGGGGACGCCGTGGACGAAATCCGCGGCTCTCTCAAGCAGATGCGCCAAATTGGGGCCGCTGGCTCAGGCGAGGAATCGTTCAGGTTCCAGATGAGTAACGTGCAGACTTGGATGAGCGCGGCGCTGACGGACGAGGAGACATGTACAGAGGGCTTCGAGGACGTGGCGGACAATCCGGTGAAGGCGGATGTGTGCGATAAGGTCACGGACCTGAAGAAGTTCACCAGTAACGCCTTAGCGCTGGTAAATAATTACGCCAACACGGGAACGCCTTGA 627 0.5997 MTTRRLLLLLLFSSTFFFLHPSTTAGHSYSTAPSPNSSDFIRTSCGATLYPDICYTSLSRYSNAVQQNPGQLARVAISVSLSKAHRMASYISNLTRDADYEANSRAASALHDCFSNVGDAVDEIRGSLKQMRQIGAAGSGEESFRFQMSNVQTWMSAALTDEETCTEGFEDVADNPVKADVCDKVTDLKKFTSNALALVNNYANTGTP 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1319 208 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 202 IPR035513 -
Lele53g1319 208 SMART PMEI_2 36 198 IPR006501 GO:0004857
Lele53g1319 208 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 202 IPR035513 -
Lele53g1319 208 CDD PMEI-like_3 43 204 - -
Lele53g1319 208 FunFam Pectin methylesterase inhibitor 1 36 202 - -
Lele53g1319 208 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 198 - -
Lele53g1319 208 Pfam Plant invertase/pectin methylesterase inhibitor 39 198 IPR006501 GO:0004857
Lele53g1319 208 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 202 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1319 Lele-ChrLele53 21534591 21535217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1319 41 198 Carbohydrate Esterase AT5G53370 28.750 5.60e-15 71.2