Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1314 ATGACCAAGTCTCACAGTTTTCTTCATAATTTGATTAAGCCCTTCAAATTCGGTTCCAGTAAAGAGGGAAGCAACCAAGAAGAGTTAGAGAGAATTGCTGCCCAGGAGCAAAAGATCTTTCCCTATGAAAACTTACTTGCTGCTACCAAAAATTTTCATTCTCATCATAAGCTTGGTGAGGGAGGTTTTGGACCCGTCTACAAGGGGAAGTTGGACGATGGAAGAGAGATTGCCGTAAAGAAGTTATCGCAAAGCTCAAATCAAGGGAACAAAGAGTTTATGAATGAGGCCAAGTTGTTGGCTCGCGTGCAGCACCGGAATGTGGTGAATTTGTTGGGTTATTGTGCCCATGGCACAGAGAAGCTACTTGTGTATGAGTATGTTCCTCATGAGAGCCTTGACAAACTTTTATTCAAATCTCACAGAAGAGAGCAGCTAGATTGGAAAAAGAGGTTTGACATAATCACAGGCATTGCAAGGGGATTACTCTATCTTCACGAAGATTCGCATAGCTGCATCATCCACCGAGACATCAAGGCTAGTAATATCTTGCTCGATGACAAATGGATGCCCAAGATTGCAGACTTTGGCATGGCTCGTCTCTTCCCCGAGGATCAAACTCACGTCAATACGCGGGTGGCTGGCACCAATGGATATATGGCTCCAGAGTATGTAATGCATGGGCATTTATCAGCGAAGGCAGATGTGTTTAGCTATGGGGTTTTGGCGCTGGAGCTGATAAGTGGCCAAAGAAACTCAATGTTTAGCCTTGAGGTGGATGCACATAATCTCCTTGATTGGGCATACAAGCTTTACAAGAAAGGGAGGAGCTTAGAAATTGTTGACCCTGCATTAGCAGATTCAGCAGTAGCAGATCAAGTAGCAATGTGCATACAACTGGGTCTGCTATGTGTTCAAGGGGATCCGCAGCTCCGGCCAAGCATGCGGCGGGTGGTGGTGATGCTGTCGAAGAAGCCGGGCCACATGGATGAGCCGACTAGACCGGGAGCGCCTGGTTCCAGATACAGAAGGCCTCGCAGGCCATCTGCATTTTCTTCCGCTGCTGGTACTTCTGGTGCTGACTCTGATTCTCGGACTTCAAACTCAAGCAGTAACTACACCGCCACTGCAACAACACCTGGAACAAGCTCCGCCGCTCGAGAACTTGACCATCGCGGAAAACGCCCCATGAATGAGGCTTAG 1203 0.4755 MTKSHSFLHNLIKPFKFGSSKEGSNQEELERIAAQEQKIFPYENLLAATKNFHSHHKLGEGGFGPVYKGKLDDGREIAVKKLSQSSNQGNKEFMNEAKLLARVQHRNVVNLLGYCAHGTEKLLVYEYVPHESLDKLLFKSHRREQLDWKKRFDIITGIARGLLYLHEDSHSCIIHRDIKASNILLDDKWMPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSAKADVFSYGVLALELISGQRNSMFSLEVDAHNLLDWAYKLYKKGRSLEIVDPALADSAVADQVAMCIQLGLLCVQGDPQLRPSMRRVVVMLSKKPGHMDEPTRPGAPGSRYRRPRRPSAFSSAAGTSGADSDSRTSNSSSNYTATATTPGTSSAARELDHRGKRPMNEA 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1314 400 SUPERFAMILY Protein kinase-like (PK-like) 37 334 IPR011009 -
Lele53g1314 400 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
Lele53g1314 400 MobiDBLite consensus disorder prediction 351 385 - -
Lele53g1314 400 CDD STKc_IRAK 58 324 - -
Lele53g1314 400 SMART serkin_6 52 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1314 400 FunFam Cysteine-rich receptor-like protein kinase 10 129 334 - -
Lele53g1314 400 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Lele53g1314 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Lele53g1314 400 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 372 - -
Lele53g1314 400 MobiDBLite consensus disorder prediction 322 400 - -
Lele53g1314 400 Pfam Protein kinase domain 52 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele53g1314 400 Gene3D Transferase(Phosphotransferase) domain 1 128 332 - -
Lele53g1314 400 ProSiteProfiles Protein kinase domain profile. 52 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1314 Lele-ChrLele53 21500096 21503519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1314 42 338 Receptor kinase-like Gene Family AT4G23230 51.007 1.64e-108 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele53g1314 Pkinase 6.9e-51 CL0016