Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1311 ATGTTTGCCTCAACGATCCTAACACCGTCTAAATTGAAACCTTTGCATTTCGTGTTACTCCCACCAAACACCAACCTCGAAATCTTCCCAACTGGAAGAAGAATATACCGGAGAAGCAGAGTGTCAGCTTATTCTAAATTAGCCCATCACAGTTGCCGTCTTCACCCGAAATCGAACACTAGACCTGTAGTTGCCACGAGGGTCAGTAATGGGGATGATGGCGCGTTTGATGCTGCCCCACAACAGTCCTCCCCTCCTCCTCCTGACATCGAAGAAGTGAAGAGTACCTCTTCTTGCCTCGGTGATGGTTATGTGGCCTTGTTTGTTCGAATGTTAGGCTTAGATCATGATCCTCTTGATAGAGAACAGGCTATAATTGCTCTGTGGAAATATTCACTTGGCGGAAAGCAGTGTGTTGATACTTTAATGCGATTTCCTGGCTGTATTAATCTTACTGTGAACCTCCTCAGATCAGATTCTAGTTCATCATGTGAAGCAGCGGCAGGCCTTCTGCGATCTCTGTCTTCAATCAATCTATACAGGAATTCGGTAGCAGAGAGTGGAGCAATAGAAGAAATAAACAGACTGCTGAGGAAGTCTTCCTTGGCTCCTGAGGAAAAGGAGCAGAGTATGAGTACGTTGTGGAATTTATCTGTGGATGAGAAGCTCCGCATTAAACTTGCAAGGAGTGATATCCTGCCATTGATCATTAAGTACCTTGAAGACGAAGATGTAAAAGTGAAGGAAGCTGCGGGAGGCATATTGGCAAATTTAGCTTTGAACCATGTTAACCACAGCATTTTGGTTGAAGCAGGCGTTATACCAAAATTGGCGAAGTTCTTAACTTCTGATCCTGAAGGATCCAAAGTTCTTAAAAAGGAAGCAAAAAATGCATTGCTGGAATTTGTTAGGGATGAATATTATAAAATTCTTGTCGTTGAGGAAGGTCTGGTTCCTGTGCCACTGATTGGTGCTGAGGCATACAAGTCATTCTCCCCTGGTCTGCATTCGTGGCCCAAATTACCAGATGGTACAGAGATTGAACGGGCTCCTCTAAAACCTTCCAGGTATGGTGCGTCAGAATTACTTCTTGGACTTAATATTGATGAAAAGAGTGCTAACATAGAGGAAGGAAAAATGAATGCGATTGTGGGACGGACACAACAACAATTCCTTGCTCGTATTGGGGCTATAGAATGGGAAGGAAAAAGCGCATCTGATTCTGAAAGCTCTGATAGGCAACAACTTACACTTTTACCTTGGATGGATGGTGTTGCTCGCTTAGTACTTATTCTAGAACTAGAAGATAAGTCTGCCATAAAAAAGGCTGCAGAGTCAATAGCTGATGTATCTATCAATGAACATATTCGCATCGCATTCAAGGAGGCTGGAGTTGTTAAGCATTTAGTTCGGCTTTTGAATTGTGATGATGCTTCTGTCAGATTGGCTGTAACTCAAGCTTTGGAGAGGTTGTCTGCCAGCAATGGAGTCTGCCAGAAAATTGAATCTGAGGGAGCGTTAGGCCCTTTAATTAATATTCTAAAATGCTCAGAGATTTCTGAAACTACTGTAGAAAAGTCTTTGAATACGATTGCTCGCATACTAGACCCCAGTAAAGAGATGAAATTGAAGTTTTACGATGGACCAGTTAATGGATTTAAAAAGGTCTTAAGTGGAGTTAGAAATGATGCTGTTTCAGCTAGCTTTAGTACCACTGAATATCCGATATCAAAGACCACGACCAGGAATGATGTATTGGATTCTGCTTTAGTAGCCCGCCTTGTTGAGATTCTGAAGTCCTCTTCTTCCAGTTTACAAGGAAAAGCTGCATCAGTTCTCGAGTTTGTTGCTTTGACTGACCCAACTATGGTCTCTATTATATCTGTAGATATTGAATCTGCTCTCGATGCTGTCTTTCAGCAAAAAATTTTGAGAATTTCAGGTGGAGAACCTGATGTAGAAGATCAGGTTTCAGAAGCATACCCTATTGAAGTTGAAGAAGCTGGGCTTGCCATATCAGCAGCATCCCGGTTAATGACAAGACTACTCGACTATCAGCATTTTTGCGACAAAGTAAATTCCTTCCATTTCATTGGCTTGCTTCGAAAACTCCTTAAGTCTTGCATTCCTCTCCACAGCAAAGACTGGGTGGCTGCTTGCCTAATTAAACTCAGCTCTCTCTCCAGTGACAACCCAAAAAGTCTCGATCCAATCAACGTGGAAGTTACACTTTATGAGACAATCCCAAGACTCGTAGAACAGATAAAAACTTCATTCTCTCTGGAAGCACAGGAATCTGCTGTTGTAGAACTGAACAGATTAATATCTGAAGAAGTGGAGCATTCTGCTAGAGCCATTGTGGTGGAGGGGGCAATAGAGCCATTGGTGAAGCTGATAGAAGAAGGAAGTGGAAGGGCGGTTGAAGCAGGATTGGCCATATTGTATAATCTGAGCATGGAACCTGAGAACCATTCATTGATTCTGGCTGCTGGAGCAGTCCCTGTATTGAGAAGGATTGTGCTCTCACAAAGGCCACAATGGGAAAAGGCACTTCATTTACTCAGGAATTTGCCTACTTGA 2580 0.4271 MFASTILTPSKLKPLHFVLLPPNTNLEIFPTGRRIYRRSRVSAYSKLAHHSCRLHPKSNTRPVVATRVSNGDDGAFDAAPQQSSPPPPDIEEVKSTSSCLGDGYVALFVRMLGLDHDPLDREQAIIALWKYSLGGKQCVDTLMRFPGCINLTVNLLRSDSSSSCEAAAGLLRSLSSINLYRNSVAESGAIEEINRLLRKSSLAPEEKEQSMSTLWNLSVDEKLRIKLARSDILPLIIKYLEDEDVKVKEAAGGILANLALNHVNHSILVEAGVIPKLAKFLTSDPEGSKVLKKEAKNALLEFVRDEYYKILVVEEGLVPVPLIGAEAYKSFSPGLHSWPKLPDGTEIERAPLKPSRYGASELLLGLNIDEKSANIEEGKMNAIVGRTQQQFLARIGAIEWEGKSASDSESSDRQQLTLLPWMDGVARLVLILELEDKSAIKKAAESIADVSINEHIRIAFKEAGVVKHLVRLLNCDDASVRLAVTQALERLSASNGVCQKIESEGALGPLINILKCSEISETTVEKSLNTIARILDPSKEMKLKFYDGPVNGFKKVLSGVRNDAVSASFSTTEYPISKTTTRNDVLDSALVARLVEILKSSSSSLQGKAASVLEFVALTDPTMVSIISVDIESALDAVFQQKILRISGGEPDVEDQVSEAYPIEVEEAGLAISAASRLMTRLLDYQHFCDKVNSFHFIGLLRKLLKSCIPLHSKDWVAACLIKLSSLSSDNPKSLDPINVEVTLYETIPRLVEQIKTSFSLEAQESAVVELNRLISEEVEHSARAIVVEGAIEPLVKLIEEGSGRAVEAGLAILYNLSMEPENHSLILAAGAVPVLRRIVLSQRPQWEKALHLLRNLPT 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1311 859 Gene3D - 91 325 IPR011989 -
Lele53g1311 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 790 832 IPR000225 GO:0005515
Lele53g1311 859 Pfam Armadillo/beta-catenin-like repeat 455 493 IPR000225 GO:0005515
Lele53g1311 859 Gene3D - 643 859 IPR011989 -
Lele53g1311 859 Gene3D - 410 642 IPR011989 -
Lele53g1311 859 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 231 273 IPR000225 GO:0005515
Lele53g1311 859 SUPERFAMILY ARM repeat 103 534 IPR016024 -
Lele53g1311 859 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 34 859 - -
Lele53g1311 859 SMART arm_5 820 859 IPR000225 GO:0005515
Lele53g1311 859 SMART arm_5 780 819 IPR000225 GO:0005515
Lele53g1311 859 SMART arm_5 453 493 IPR000225 GO:0005515
Lele53g1311 859 SMART arm_5 494 536 IPR000225 GO:0005515
Lele53g1311 859 SMART arm_5 177 219 IPR000225 GO:0005515
Lele53g1311 859 SMART arm_5 261 304 IPR000225 GO:0005515
Lele53g1311 859 SMART arm_5 135 176 IPR000225 GO:0005515
Lele53g1311 859 SMART arm_5 220 260 IPR000225 GO:0005515
Lele53g1311 859 SMART arm_5 578 618 IPR000225 GO:0005515
Lele53g1311 859 MobiDBLite consensus disorder prediction 66 93 - -
Lele53g1311 859 SUPERFAMILY ARM repeat 425 846 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1311 Lele-ChrLele53 21472743 21478080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1311 147 320 U-box Gene Family AT2G23140 31.034 9.63e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele53g1311 53 21472743 21478080 Lele55g0168 55 1062945 1068313 hybridization