Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1302 ATGGATAACGTTCTGGGTCTTCTCAAACTTCGCATCAAGAGAGGTATTTCTCTCGCAATTCGTGATACTCGCAGCAGTGACCCTTATGTTGTTGTCACGTTGGGCGACCAGAAAGTGAAGACTCGTGTCGTGAAGAATAACCGCAACCCTCAGTGGGATGATGAATTGACACTCTCTGTTAAGGATATAAACTCTCCAATTCATCTTGAAGTTTTTGACCAGGACACATTCACCATGGATGACAAAATGGGGGATGCAGAAATAGACATAAAGCCATATCTTGAGTGTCTGAAGATGAACTTGGCCAACCTCCCAAATGGTTGTGTGGTGAAGAGAGTTCAACCAGATGGGAAAAACTACCTTGCTGATGAGAGCAGCTGCATATGGAAGAACGGAAAAATCACGCAAGAAATGACTCTTGCCTTGAGAAATGTAGAATGTGGCTACGTAGTTGTGGAAATCGAGTGGAAGGAAGTTCCGGGCTGCAAGGGCTTATCTGGGATTGAGATCTAA 513 0.4444 MDNVLGLLKLRIKRGISLAIRDTRSSDPYVVVTLGDQKVKTRVVKNNRNPQWDDELTLSVKDINSPIHLEVFDQDTFTMDDKMGDAEIDIKPYLECLKMNLANLPNGCVVKRVQPDGKNYLADESSCIWKNGKITQEMTLALRNVECGYVVVEIEWKEVPGCKGLSGIEI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1302 170 Gene3D C2 domain 2 161 IPR035892 -
Lele53g1302 170 CDD C2_ArfGAP 5 148 - -
Lele53g1302 170 Pfam C2 domain 7 92 IPR000008 -
Lele53g1302 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 156 IPR035892 -
Lele53g1302 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Lele53g1302 170 SMART C2_3c 7 102 IPR000008 -
Lele53g1302 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1302 Lele-ChrLele53 21419484 21421228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1302 38 166 C2H2 Transcription Factor Family AT1G70790 59.542 2.46e-53 164