Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1292 ATGGAACCTGATGGCACCACCTCTAACAACAGAGCAGTCCTCTCGCATTGCCTCCAAATAAACATGGAAGAAACTCACAAGGTGGTCGCGCCACCTCGCCGGACCACCCTGGAGAAGCTGACCGCGAAGCTGAAAGAAATGTTCTTCCCCGACGACCCTCTTCGCCAATTCAAGGGCCAGCCATTGAAGAAGAAGCTGGTCCTCGCAGCCCAGTATTTCTTCCCCATTCTTCAATGGGGTCCCAATTACAGCTTCACTCTCCTCAAATCCGACATCGTTTCCGGCCTCACCATTGCCAGCTTGGCCATCCCTCAGGGAATCAGTTATGCTAAGCTGGCAAGCCTTCCTCCGATTGTGGGACTCTATTCGAGCTTTGTGCCTCCTCTGGTTTATGCCGTTCTGGGAAGTTCAAGGGACCTCGCTGTGGGACCCGTGTCTATAGCGTCTCTTGTTCTGGGGTCGATGCTGAGACAAGAGGTGTCCCCAGCTTCTGACCCTGTTCTGTTTCTTGAGCTAGCTTTCACTTCTACCTTCTTTGCCGGTCTCTTTCAAGCGTCTCTTGGAATCCTAAGGCTAGGTTTCATTATTGACTTCTTATCAAAGGCGATTCTGATTGGGTTTATGGCGGGAGCCGCCATAATTGTGTCTCTGCAACAACTAAAAAGCTTACTGGGAATCACACATTTCACCACCCAGATGGGCCTAGTTCCTGTGATGACCTCAGTTTTTCACAATACCCATGAGTGGTCATGGCAAACAATAGTGATGGGGGTTTGCTTCTTGGTGTTACTCCTACTGGCAAGACACGTTAGCATGAGGAAGCCAAAGCTTTTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTGATAATCTCTACCCTTCTAGTATTTGCAATAAAGGCTCAGCATCATGGCATCAGTGTTATAGGAAAATTGCAAGAAGGTCTAAATCCTCCTTCATGGAATATGCTTCGCTTTCATGGAACTCATCTGGGTCTTGTCATCAAAACTGGGCTTATCACTGGCATTTTGTCCCTCACTGAAGGTATTGCAGTAGGAAGGACTTTTGCAGCTCTCAAGAACTACAAAGTGGATGGAAATAAGGAGATGATGGCAATCGGCTTCATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTCACTACAGGTGCCTTCTCTAGATCAGCTGTGAATAACAATGCAGGAGCAAAATCAGCCGTGTCGAATATAGTGATGTCTGTGACAGTTATGGTGACACTCCTGTTTCTTATGCCATTGTTTCAATACACTCCGAATGTTGTGCTAGGAGCAATCATAGTCACAGCAGTAATTAGTCTCATTGATATCCCTGCCGCTTATTACATCTGGAAGTTAGACAAATATGATTTCATCGTGATGCTCACCGCGTTCTTCGGTGTCATTTTTATCTCTGTTCAAGAAGGCCTCGCTCTCGCAGTCGGGTTGTCGATATTAAAGATCCTCCTGCAAGTTACAAGGCCGAAGACAGTGATGTTGGGCAACATACCAGGTACAGACATATATCGAAATGTTGATCATTACGAGGAAGCTGTTAAGTTGCCTGGTTTTCTCATTTTAAGCATCGAGGCTCCCATAAATTTCGCAAACATCACATATCTCAACGAGAGGATGTTACGATGGATAGAAGAATATGAACAGGAAAATAACATAAAAAAAAACTCAAGTCTTCGATATGTGATTCTGGAAATGTCAGCTGTGAGCAACGTAGACACAAGTGGGGTCTCACTTTTCAGGGAACTGAAACAAGCAATGAAAAACAAGGGCGTTGAGATTGTGTTGGTGAATCCTCTGGCTGAGGTTATGGAGAAGTTGAAAAAAGCAGATGAAGGCGGTGAATTGATACGAGAAGATAACCTTTTCTTAACAGTTGGGGAGGCCGTGGCTTCGCTTTCATCGATGACCAAGGGCCAAGCGTCAAACATGGAAGAAGGGGCTCACTTCTGA 1983 0.4619 MEPDGTTSNNRAVLSHCLQINMEETHKVVAPPRRTTLEKLTAKLKEMFFPDDPLRQFKGQPLKKKLVLAAQYFFPILQWGPNYSFTLLKSDIVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPASDPVLFLELAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTTQMGLVPVMTSVFHNTHEWSWQTIVMGVCFLVLLLLARHVSMRKPKLFWVSAGAPLVSVIISTLLVFAIKAQHHGISVIGKLQEGLNPPSWNMLRFHGTHLGLVIKTGLITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKSAVSNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVISLIDIPAAYYIWKLDKYDFIVMLTAFFGVIFISVQEGLALAVGLSILKILLQVTRPKTVMLGNIPGTDIYRNVDHYEEAVKLPGFLILSIEAPINFANITYLNERMLRWIEEYEQENNIKKNSSLRYVILEMSAVSNVDTSGVSLFRELKQAMKNKGVEIVLVNPLAEVMEKLKKADEGGELIREDNLFLTVGEAVASLSSMTKGQASNMEEGAHF 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1292 660 CDD STAS_SulP_like_sulfate_transporter 520 636 - -
Lele53g1292 660 PANTHER SULFATE TRANSPORTER 37 644 IPR001902 GO:0016020|GO:0055085
Lele53g1292 660 ProSiteProfiles STAS domain profile. 519 643 IPR002645 -
Lele53g1292 660 FunFam Sulfate transporter 31 499 646 - -
Lele53g1292 660 Gene3D STAS domain 499 645 IPR036513 -
Lele53g1292 660 Pfam Sulfate permease family 88 468 IPR011547 GO:0016020
Lele53g1292 660 Pfam STAS domain 520 639 IPR002645 -
Lele53g1292 660 SUPERFAMILY SpoIIaa-like 524 643 IPR036513 -
Lele53g1292 660 TIGRFAM sulP: sulfate permease 75 639 IPR001902 GO:0016020|GO:0055085
Lele53g1292 660 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1292 Lele-ChrLele53 21357525 21362439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1292 24 651 Inorganic Solute Cotransporters AT3G15990 65.556 0.0 842