Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele53g1282 ATGGCTCTTACAGGCCTGGTTTCGCTCGTGTTCGATTTTATTGGCCTTGTCCCAGATAAGATCAATCATCAGAAGCAGGCAATTTCAAGTGAATCATCAGCAGAAGCACCGAGGTTGATCGAAGTTGATTGGTGCTGTGTGTGTTTGTCTAGGTTAAAGGAGAAAGACGAGACGAGGGTTCTTCCTTGCTTTCACAGATTCCATAAACAGTGTGTAGATAAATGGCTCAATAAGGGTCGCCACAAAACATGTCCTCTTTGTCGTTTCTCGATGGTGGCAGAAGATCAGAATAAGTCTCTTGCTTCTGCAGAATTCACTGAGGATATGCTTGGCGATCCTGTTCATATGGAATTTATTTCGCCCCCTAACTTGTGCTATTGGTGA 384 0.4401 MALTGLVSLVFDFIGLVPDKINHQKQAISSESSAEAPRLIEVDWCCVCLSRLKEKDETRVLPCFHRFHKQCVDKWLNKGRHKTCPLCRFSMVAEDQNKSLASAEFTEDMLGDPVHMEFISPPNLCYW 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele53g1282 127 ProSiteProfiles Zinc finger RING-type profile. 45 88 IPR001841 -
Lele53g1282 127 PANTHER TARGET OF ERK KINASE MPK-1 25 94 - -
Lele53g1282 127 Pfam Ring finger domain 44 88 IPR001841 -
Lele53g1282 127 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 104 IPR013083 -
Lele53g1282 127 SUPERFAMILY RING/U-box 44 94 - -
Lele53g1282 127 SMART ring_2 45 87 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele53g1282 Lele-ChrLele53 21310139 21310865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele53g1282 16 91 C3H Transcription Factor Family AT1G04790 38.554 9.33e-13 62.0